Pre_GI: BLASTP Hits

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Query: NC_010606:25090:26558 Acinetobacter baumannii ACICU plasmid pACICU2, complete sequence

Start: 26558, End: 28717, Length: 2160

Host Lineage: Acinetobacter baumannii; Acinetobacter; Moraxellaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Acinetobacter baumannii strain ACICU (also called H34)was isolated from an outbreak in an intensive care unit in Rome, Italy. This bacterium is commonly isolated from the hospital environment and hospitalized patients. It is an aquatic organism, and is often cultured from liquid medical samples such as respiratory secretions, wounds, and urine. Acinetobacter also colonizes irrigating solutions and intravenous solutions. Although it has low virulence, it is capable of causing infection. Most isolates recovered from patients represent colonization rather than infection. When infections do occur, they usually occur in the blood, or in organs with a high fluid content, such as the lungs or urinary tract. Infections by this organism are becoming increasingly problematic due to the high number of resistance genes found in clinical isolates. Some strains are now resistant to all known antibiotics. Most of these genes appear to have been transferred horizontally from other organisms.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016846:24500:5201252012542912280Klebsiella pneumoniae subsp. pneumoniae HS11286 plasmid pKPHS2,conjugal transfer protein TraD3e-74280
NC_009998:62000:7347873478756042127Shewanella baltica OS195 plasmid pS19501, complete sequencetype IV conjugative transfer system coupling protein TraD1e-73278
NC_008322:1186000:1186944118694411889171974Shewanella sp. MR-7, complete genomehypothetical protein4e-73276
NC_007385:157516:1664251664251686262202Shigella sonnei Ss046 plasmid pSS_046, complete sequenceTraD protein1e-71271
NC_010660:175200:1802001802001822452046Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence5e-71269
NC_010793:1811401:1863476186347618652301755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD9e-71268
NC_010793:1508974:1513498151349815152521755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD7e-70265
NC_010793:1158279:1169124116912411708781755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD7e-70265
NC_010793:416849:4208424208424225961755Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD7e-70265
NC_009488:89844:1125211125211142781758Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-69263
NC_007607:87000:9356593565950791515Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequencehypothetical protein5e-69262
NC_017044:702483:7220847220847237781695Rickettsia parkeri str. Portsmouth chromosome, complete genomeconjugative transfer protein TraD1e-68261
NC_010793:1468849:1468849146884914703841536Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD2e-66254
NC_009787:17344:4718471869492232Escherichia coli E24377A plasmid pETEC_35, complete sequencetype IV conjugative transfer system coupling protein TraD2e-60234
NC_009007:57804:7373273732760142283Rhodobacter sphaeroides 2.4.1 plasmid A, partial sequenceTraG3e-59230
NC_004460:708416:7124647124647145572094Vibrio vulnificus CMCP6 chromosome II, complete sequenceType IV secretory pathway, VirD4 component8e-56219
NC_007722:851129:8667998667998691382340Erythrobacter litoralis HTCC2594, complete genomeTraD2e-54214
NC_007722:168937:1869601869601892992340Erythrobacter litoralis HTCC2594, complete genomeTraD9e-51202
NC_011916:467106:4915124915124933291818Caulobacter crescentus NA1000 chromosome, complete genomeconjugation protein, ATP binding domain trwB1e-50202
NC_009484:2660048:2677156267715626790061851Acidiphilium cryptum JF-5 chromosome, complete genomeType IV secretory pathway VirD4 components-like protein2e-49197
NC_007722:2954876:2956825295682529590802256Erythrobacter litoralis HTCC2594, complete genomeTraD5e-49196
NC_011296:281930:2970702970702987821713Thermodesulfovibrio yellowstonii DSM 11347, complete genomeputative conjugative transfer protein TraD3e-48193
NC_010793:1628500:1641810164181016428201011Orientia tsutsugamushi str. Ikeda, complete genomeputative conjugative transfer protein TraD2e-47191
NC_009488:854500:857766857766858722957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein3e-46187
NC_011891:1225000:1245654124565412471831530Anaeromyxobacter dehalogenans 2CP-1, complete genometype IV secretion system protein VirD42e-46187
NC_014819:25765:4626046260488752616Asticcacaulis excentricus CB 48 plasmid pASTEX02, completehypothetical protein7e-46186
NC_009488:803873:809270809270810226957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein8e-46186
NC_009488:1249492:125489812548981255854957Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein8e-46186
NC_009488:1465781:1479205147920514803501146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein1e-45185
NC_015458:327009:3591473591473608261680Pusillimonas sp. T7-7 chromosome, complete genomeTrwB9e-45182
NC_010170:3908500:3929234392923439308801647Bordetella petrii, complete genometype IV secretion system protein VirD46e-44179
NC_009488:1391975:1405801140580114069461146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein4e-44179
NC_009488:1673756:1685432168543216865771146Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein4e-44179
NC_016626:1751159:1754229175422917558721644Burkholderia sp. YI23 plasmid byi_1p, complete sequenceputative TraB protein, type IV secretion system8e-42172
NC_017028:1030000:104422810442281045058831Candidatus Rickettsia amblyommii str. GAT-30V chromosome, completeputative conjugative transfer protein TraD4e-39163
NC_016631:3917253:3934403393440339363731971Granulicella mallensis MP5ACTX8 chromosome, complete genomeType IV secretion system, TraD, DNA-binding domain protein3e-38160
NC_012483:3672768:3674604367460436766042001Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein2e-35151
NC_012483:3731542:3752837375283737548311995Acidobacterium capsulatum ATCC 51196, complete genomehypothetical protein1e-33145
NC_017044:702483:719163719163719666504Rickettsia parkeri str. Portsmouth chromosome, complete genomeputative conjugative transfer protein TraD2e-25118
NC_009488:1430693:143360714336071434488882Orientia tsutsugamushi str. Boryong, complete genomeconjugative transfer protein2e-24115
NC_007404:1776147:1776147177614717785012355Thiobacillus denitrificans ATCC 25259, complete genomeputative type IV secretory pathway VirD4 components3e-22107
NC_020453:3950838:3988683398868339904941812Agromonas oligotrophica S58 DNA, complete genomeputative type IV secretory pathway VirD4 components6e-22106
NC_012654:170956:1875941875941895401947Clostridium botulinum Ba4 str. 657 plasmid pCLJ, complete sequenceATPase involved in conjugal plasmid transfer8e-2099.4
NC_015850:1006980:1013904101390410157931890Acidithiobacillus caldus SM-1 chromosome, complete genomehypothetical protein4e-1687
NC_003869:1971766:1982399198239919844022004Thermoanaerobacter tengcongensis MB4, complete genomeATPase involved in conjugal plasmid transfer4e-1273.9
NC_011729:2732163:2747512274751227492211710Cyanothece sp. PCC 7424 chromosome, complete genometransfer complex protein TrsK-like protein7e-1273.2
NC_011737:102615:1062651062651081811917Cyanothece sp. PCC 7424 plasmid pP742402, complete sequencetransfer complex protein TrsK-like protein2e-1172
NC_014502:113839:1141601141601160821923Cyanothece sp. PCC 7822 plasmid Cy782203, complete sequenceTRAG family protein2e-1171.2
NC_013926:974668:9746689746689764761809Aciduliprofundum boonei T469 chromosome, complete genomeType IV secretory pathway VirD4 protein-like protein5e-1170.5
NC_007644:362000:3679313679313699161986Moorella thermoacetica ATCC 39073, complete genomeTRAG protein9e-1169.3
NC_007798:652317:6585716585716604961926Neorickettsia sennetsu str. Miyayama, complete genometype IV secretion system protein VirD49e-1169.3
NC_005295:21995:3116531165335702406Ehrlichia ruminantium str. Welgevonden, complete genometype IV secretion system protein VirD42e-1068.6
NC_013532:85371:8641786417888432427Anaplasma centrale str. Israel, complete genometype IV secretion system protein VirD42e-1068.6
NC_004842:1132441:1154957115495711573772421Anaplasma marginale str. St. Maries, complete genomeVirD4 protein2e-1068.6
NC_012026:1135041:1159067115906711614872421Anaplasma marginale str. Florida, complete genomeVirD4 protein (virD4)2e-1068.6
NC_006831:4500:1217012170145722403Ehrlichia ruminantium str. Gardel, complete genomePutative virD4 protein1e-1068.6
NC_010943:3069082:3098061309806130999351875Stenotrophomonas maltophilia K279a, complete genomeputative type IV secretory protein conjugation protein TraD2e-1068.2
NC_007797:1451804:1460198146019814624202223Anaplasma phagocytophilum HZ, complete genometype IV secretion system protein VirD44e-1067.4
NC_014910:2930860:2935496293549629375022007Alicycliphilus denitrificans BC chromosome, complete genometrag family protein6e-1066.6
NC_015221:12389:3188831888337321845Nitrosomonas sp. AL212 plasmid pNAL21202, complete sequenceTRAG family protein6e-1066.6
NC_014834:959986:9681419681419701261986Rhodopseudomonas palustris DX-1 chromosome, complete genomeTRAG family protein7e-1066.6
NC_017249:18493:3729937299392811983Bradyrhizobium japonicum USDA 6, complete genomeconjugal transfer protein1e-0965.5
NC_015942:722980:7396097396097418762268Acidithiobacillus ferrivorans SS3 chromosome, complete genomeTRAG family protein2e-0964.7
NC_016814:18000:3264032640347392100Sinorhizobium fredii HH103 plasmid pSfHH103c complete sequenceProtein virD42e-0964.7
NC_004463:18497:3730537305393322028Bradyrhizobium japonicum USDA 110, complete genomeconjugal transfer protein2e-0964.7
NC_003295:2787371:2792029279202927940562028Ralstonia solanacearum GMI1000, complete genomePROBABLE PLASMID CONJUGATION TRAG TRANSMEMBRANE PROTEIN3e-0964.3
NC_010321:35855:4888548885507171833Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeTRAG family protein4e-0963.9
NC_014964:35862:4889248892507241833Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeTRAG family protein4e-0963.9
NC_012416:4973:83058305103232019Wolbachia sp. wRi, complete genometype IV secretion system protein VirD44e-0963.9
NC_012034:2623252:2641160264116026430371878Anaerocellum thermophilum DSM 6725, complete genomeTRAG family protein5e-0963.5
NC_014910:242845:2432882432882452912004Alicycliphilus denitrificans BC chromosome, complete genometrag family protein8e-0963.2
NC_014652:379833:3913543913543932311878Caldicellulosiruptor hydrothermalis 108 chromosome, completetrag family protein1e-0862.4
NC_014100:2782000:2795208279520827971601953Caulobacter segnis ATCC 21756 chromosome, complete genomeTRAG family protein1e-0862.4
NC_018691:3082000:3095819309581930978222004Alcanivorax dieselolei B5 chromosome, complete genomeTraG-like protein1e-0862
NC_002978:4973:82698269102151947Wolbachia endosymbiont of Drosophila melanogaster, complete genometype IV secretion system protein VirD42e-0862
NC_012982:711122:7139907139907159751986Hirschia baltica ATCC 49814, complete genomeTRAG family protein2e-0861.6
NC_010002:2933909:2969111296911129711202010Delftia acidovorans SPH-1, complete genomeTRAG family protein2e-0861.6
NC_015850:169180:1721031721031744572355Acidithiobacillus caldus SM-1 chromosome, complete genomeTRAG family protein3e-0861.2
NC_011987:53760:5376053760561232364Agrobacterium radiobacter K84 plasmid pAtK84c, complete sequenceTRAG protein3e-0861.2
NC_015381:2859000:2881633288163328836362004Burkholderia gladioli BSR3 chromosome 1, complete sequenceconjugal transfer protein TraG3e-0861.2
NC_015259:734795:7358277358277374221596Polymorphum gilvum SL003B-26A1 chromosome, complete genomePlasmid transfer factor, traG2e-0861.2
NC_015589:3813415:3815476381547638174491974Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeTRAG family protein3e-0860.8
NC_009720:4406991:4434900443490044368791980Xanthobacter autotrophicus Py2, complete genomeconjugal transfer coupling protein TraG4e-0860.8
NC_014816:1592799:1596795159679515984711677Asticcacaulis excentricus CB 48 chromosome 1, complete sequencetrag family protein4e-0860.5
NC_015556:2265940:2270422227042222724131992Pseudomonas fulva 12-X chromosome, complete genomeTRAG family protein4e-0860.5
NC_007643:955362:9676959676959688191125Rhodospirillum rubrum ATCC 11170, complete genome5e-0860.5
NC_009879:835227:8468038468038485781776Rickettsia canadensis str. McKiel, complete genomehypothetical protein7e-0860.1
NC_016929:825413:8369198369198386941776Rickettsia canadensis str. CA410 chromosome, complete genometype IV secretion system protein VirB87e-0860.1
NC_015259:673662:6761806761806777571578Polymorphum gilvum SL003B-26A1 chromosome, complete genomePlasmid transfer factor, traG6e-0860.1
NC_011992:3752867:3757497375749737595002004Acidovorax ebreus TPSY, complete genomeTRAG family protein7e-0859.7
NC_010943:1332243:1334372133437213363722001Stenotrophomonas maltophilia K279a, complete genomeputative conjugal transfer protein8e-0859.7
NC_015589:712626:7180157180157200752061Desulfotomaculum ruminis DSM 2154 chromosome, complete genomeTRAG family protein1e-0759.3
NC_014414:2540189:2553515255351525553531839Parvularcula bermudensis HTCC2503 chromosome, complete genomeconjugal transfer protein traG1e-0759.3
NC_007925:3933765:3946807394680739488011995Rhodopseudomonas palustris BisB18, complete genomeTRAG protein1e-0758.9
NC_013422:1755875:1779991177999117824622472Halothiobacillus neapolitanus c2, complete genomeTRAG family protein1e-0758.9
NC_008577:1489643:1491078149107814930751998Shewanella sp. ANA-3 chromosome 1, complete sequenceTRAG family protein1e-0758.9
NC_008781:2655071:2665222266522226672071986Polaromonas naphthalenivorans CJ2, complete genomeTRAG family protein1e-0758.9
NC_011365:1135750:1154211115421111561931983Gluconacetobacter diazotrophicus PAl 5 chromosome, complete genomeconjugal transfer coupling protein TraG1e-0758.9
NC_015259:485015:5308405308405323061467Polymorphum gilvum SL003B-26A1 chromosome, complete genomePlasmid transfer factor, traG2e-0758.5
NC_014816:545441:5663965663965680721677Asticcacaulis excentricus CB 48 chromosome 1, complete sequencetrag family protein2e-0758.5
NC_010338:2443765:2450624245062424523451722Caulobacter sp. K31, complete genomeTRAG family protein2e-0758.2
NC_006371:1743982:1769029176902917708911863Photobacterium profundum SS9 chromosome 2, complete sequencehypothetical protein TraG2e-0758.2
NC_015942:1947258:1965686196568619681812496Acidithiobacillus ferrivorans SS3 chromosome, complete genomeTRAG family protein2e-0758.2
NC_015850:1220444:1220444122044412230202577Acidithiobacillus caldus SM-1 chromosome, complete genomeTraG4e-0757.4
NC_009931:117904:1293991293991311741776Acaryochloris marina MBIC11017 plasmid pREB6, complete sequencehypothetical protein4e-0757.4
NC_009719:1972545:1984249198424919863122064Parvibaculum lavamentivorans DS-1 chromosome, complete genomeconjugal transfer coupling protein TraG4e-0757.4
NC_018867:1357540:1360767136076713625871821Dehalobacter sp. CF chromosome, complete genomeTRAG family protein5e-0757
NC_018866:1279000:1282227128222712840471821Dehalobacter sp. DCA chromosome, complete genomeTRAG family protein5e-0757
NC_010337:616304:6198006198006216201821Heliobacterium modesticaldum Ice1, complete genometrag/trad family protein, putative6e-0756.6
NC_014376:3009403:3033976303397630358231848Clostridium saccharolyticum WM1 chromosome, complete genomeTRAG family protein7e-0756.6
NC_009437:1556934:1568309156830915701471839Caldicellulosiruptor saccharolyticus DSM 8903, complete genomeTRAG family protein9e-0756.2
NC_016791:3891272:3914625391462539164421818Clostridium sp. BNL1100 chromosome, complete genometype IV secretory pathway, VirD4 component7e-0756.2
NC_007907:5185510:5263303526330352651201818Desulfitobacterium hafniense Y51, complete genomehypothetical protein1e-0655.8
NC_013722:2810721:2835935283593528376291695Xanthomonas albilineans, complete genomeputative type iv secretory pathway, conjugal transfer protein2e-0655.5
NC_021184:3533500:3549757354975735515741818Desulfotomaculum gibsoniae DSM 7213, complete genometype IV secretory pathway, VirD4 component2e-0655.1
NC_006087:765081:7678797678797697231845Leifsonia xyli subsp. xyli str. CTCB07, complete genomeconjugal plasmid transfer, ATPase2e-0655.1
NC_013722:3081459:3101807310180731035011695Xanthomonas albilineans, complete genomeputative type iv secretory pathway, conjugal transfer protein3e-0654.7
NC_017271:4058642:4069267406926740709701704Xanthomonas campestris pv. raphani 756C chromosome, completetype IV secretion system protein VirD43e-0654.7
NC_016010:1822212:1863335186333518650321698Xanthomonas axonopodis pv. citrumelo F1 chromosome, completetype IV secretion system protein VirD43e-0654.3
NC_011059:670345:6749096749096770952187Prosthecochloris aestuarii DSM 271, complete genome4e-0653.9
NC_009254:365812:3745933745933763111719Burkholderia vietnamiensis G4 chromosome 3, complete sequenceTRAG family protein4e-0653.9
NC_017271:149856:1689951689951705751581Xanthomonas campestris pv. raphani 756C chromosome, completetype IV secretion system protein VirD45e-0653.5
NC_010161:1811000:1811015181101518129311917Bartonella tribocorum CIP 105476, complete genomeVirD4 protein5e-0653.5
NC_003902:4111283:4123510412351041247211212Xanthomonas campestris pv. campestris str. ATCC 33913, completetruncated NTPase6e-0653.5
NC_020301:1449616:1454783145478314567021920Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genomeconjugal transfer protein TraG/VirD46e-0653.5
NC_007086:2887875:2924209292420929259061698Xanthomonas campestris pv. campestris str. 8004, complete genomeputative NTPase VagA1e-0552.8