Pre_GI: BLASTP Hits

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Query: NC_010581:561579:562375 Beijerinckia indica subsp. indica ATCC 9039, complete genome

Start: 562375, End: 563664, Length: 1290

Host Lineage: Beijerinckia indica; Beijerinckia; Beijerinckiaceae; Rhizobiales; Proteobacteria; Bacteria

General Information: It produces a water-soluble extracellular polysaccharide that forms a biopolymer useful for a wide range of applications to textile printing, oil and adhesive industries. This organism belongs to the Beijerinckiaceae family, which includes both methanotrophic (bacteria able to oxidize methane) and nonmethanotrophic species (like Beijerinckia indica subsp. indica). Sequencing of strains from this family presents an ideal opportunity for a comparative genomic study into the evolution and biochemistry of obligate methanotrophy.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013595:5333000:5346448534644853477341287Streptosporangium roseum DSM 43021, complete genomenickel-dependent hydrogenase large subunit4e-127454
NC_010336:852915:8692318692318705261296Francisella philomiragia subsp. philomiragia ATCC 25017, completehypothetical protein1e-99363
NC_012438:818387:8183878183878196761290Sulfurihydrogenibium azorense Az-Fu1 chromosome, complete genome[NiFe] hydrogenase, subunit alpha3e-94345
NC_013926:71186:7848978489797541266Aciduliprofundum boonei T469 chromosome, complete genomenickel-dependent hydrogenase large subunit5e-59228
NC_012883:287965:2887682887682900511284Thermococcus sibiricus MM 739, complete genomeNiFe hydrogenase I, catalytic subunit alpha1e-57224
NC_003413:857480:8665258665258678111287Pyrococcus furiosus DSM 3638, complete genomesulfhydrogenase alpha subunit2e-52207
NC_014222:613448:6231756231756245961422Methanococcus voltae A3 chromosome, complete genomenickel-dependent hydrogenase large subunit2e-39164
NC_009634:53555:6988669886713011416Methanococcus vannielii SB chromosome, complete genomenickel-dependent hydrogenase large subunit9e-39161
NC_015562:899030:9358029358029370611260Methanotorris igneus Kol 5 chromosome, complete genomehydrogen dehydrogenase1e-38160
NC_014222:1411155:1419642141964214209041263Methanococcus voltae A3 chromosome, complete genomenickel-dependent hydrogenase large subunit2e-38160
NC_015636:175660:1818451818451832691425Methanothermococcus okinawensis IH1 chromosome, complete genomehydrogen dehydrogenase1e-37157
NC_013887:189400:2005792005792019971419Methanocaldococcus sp. FS406-22 chromosome, complete genomenickel-dependent hydrogenase large subunit8e-37155
NC_015562:1189111:1202201120220112036221422Methanotorris igneus Kol 5 chromosome, complete genomehydrogen dehydrogenase1e-36154
NC_009135:620312:6253846253846267991416Methanococcus maripaludis C5, complete genomenickel-dependent hydrogenase, large subunit2e-36153
NC_009634:1002295:1011195101119510124511257Methanococcus vannielii SB chromosome, complete genomenickel-dependent hydrogenase large subunit3e-36153
NC_015636:832224:8408908408908421461257Methanothermococcus okinawensis IH1 chromosome, complete genomehydrogen dehydrogenase6e-36152
NC_009135:1654131:1664295166429516655511257Methanococcus maripaludis C5, complete genomenickel-dependent hydrogenase, large subunit1e-35150
NC_009975:917337:9270539270539283091257Methanococcus maripaludis C6, complete genomenickel-dependent hydrogenase large subunit2e-35150
NC_009635:94937:1041191041191055461428Methanococcus aeolicus Nankai-3 chromosome, complete genomenickel-dependent hydrogenase large subunit3e-35150
NC_005791:1626448:1634132163413216353881257Methanococcus maripaludis S2, complete genomeF420-non-reducing hydrogenase subunit alpha4e-35149
NC_015847:1712023:1719696171969617209521257Methanococcus maripaludis XI chromosome, complete genomeF420-non-reducing hydrogenase subunit alpha3e-35149
NC_009635:1283830:1285097128509712863531257Methanococcus aeolicus Nankai-3 chromosome, complete genomenickel-dependent hydrogenase large subunit6e-35148
NC_003551:154883:1728651728651741691305Methanopyrus kandleri AV19, complete genomeCoenzyme F420-reducing hydrogenase, alpha subunit1e-34147
NC_009637:920423:9286299286299298851257Methanococcus maripaludis C7 chromosome, complete genomenickel-dependent hydrogenase large subunit2e-34147
NC_013156:226215:2339512339512352071257Methanocaldococcus fervens AG86, complete genomenickel-dependent hydrogenase large subunit3e-34146
NC_013887:812091:8214898214898227451257Methanocaldococcus sp. FS406-22 chromosome, complete genomenickel-dependent hydrogenase large subunit4e-34145
NC_013407:1478811:1487583148758314888391257Methanocaldococcus vulcanius M7, complete genomenickel-dependent hydrogenase large subunit1e-33144
NC_014122:341365:3483463483463495901245Methanocaldococcus infernus ME chromosome, complete genomenickel-dependent hydrogenase large subunit1e-33144
NC_012108:1324885:1329332132933213306811350Desulfobacterium autotrophicum HRM2, complete genomeMvhA9e-33141
NC_011729:4591500:4607618460761846090421425Cyanothece sp. PCC 7424 chromosome, complete genomenickel-dependent hydrogenase large subunit2e-32140
NC_014658:701020:7083197083197097371419Methanothermus fervidus DSM 2088 chromosome, complete genomef420-non-reducing hydrogenase subunit a3e-32140
NC_014972:2328228:2360916236091623623431428Desulfobulbus propionicus DSM 2032 chromosome, complete genomeNAD(P)-dependent nickel-iron dehydrogenase catalytic subunit7e-32138
NC_011666:3001513:3024573302457330260391467Methylocella silvestris BL2, complete genomenickel-dependent hydrogenase large subunit6e-30132
NC_015320:1399589:1409046140904614105061461Archaeoglobus veneficus SNP6 chromosome, complete genomehydrogen dehydrogenase2e-29130
NC_007681:1455425:1467211146721114684311221Methanosphaera stadtmanae DSM 3091, complete genomeFrhA2e-23110
NC_013173:2261396:2262578226257822641221545Desulfomicrobium baculatum DSM 4028, complete genomenickel-dependent hydrogenase large subunit4e-23109
NC_014222:613448:6267466267466279781233Methanococcus voltae A3 chromosome, complete genomecoenzyme F420 hydrogenase, subunit alpha1e-22107
NC_013741:1304000:1311096131109613125651470Archaeoglobus profundus DSM 5631, complete genomenickel-dependent hydrogenase large subunit7e-22105
NC_015636:175660:1786731786731799051233Methanothermococcus okinawensis IH1 chromosome, complete genomecoenzyme F420 hydrogenase subunit alpha6e-22105
NC_009135:620312:6224326224326236641233Methanococcus maripaludis C5, complete genomenickel-dependent hydrogenase, large subunit6e-22105
NC_015499:1372361:1378098137809813796301533Thermodesulfobium narugense DSM 14796 chromosome, complete genomeHydrogen dehydrogenase2e-21103
NC_015562:1189111:1205518120551812067501233Methanotorris igneus Kol 5 chromosome, complete genomecoenzyme F420 hydrogenase subunit alpha3e-20100
NC_009635:1067334:1077463107746310786201158Methanococcus aeolicus Nankai-3 chromosome, complete genomenickel-dependent hydrogenase large subunit4e-1996.3
NC_011296:1299388:1323636132363613251561521Thermodesulfovibrio yellowstonii DSM 11347, complete genomeF420-non-reducing hydrogenase subunit A, selenocysteine-containing9e-1995.1
NC_003552:1157294:1165692116569211670621371Methanosarcina acetivorans C2A, complete genomecoenzyme F420 hydrogenase, subunit alpha8e-1995.1
NC_007355:544796:5501865501865515561371Methanosarcina barkeri str. fusaro chromosome 1, complete sequencecoenzyme F420 hydrogenase, subunit alpha2e-1790.9
NC_014365:1094516:1113854111385411153561503Desulfarculus baarsii DSM 2075 chromosome, complete genomeCytochrome-c3 hydrogenase7e-1685.5
NC_009712:2092440:2096061209606120973771317Candidatus Methanoregula boonei 6A8, complete genomenickel-dependent hydrogenase, large subunit3e-1480.1
NC_021184:1257722:1264757126475712661511395Desulfotomaculum gibsoniae DSM 7213, complete genomeNi,Fe-hydrogenase I large subunit8e-1478.6
NC_021182:1983456:1991930199193019933451416Clostridium pasteurianum BC1, complete genomeNi,Fe-hydrogenase I large subunit4e-1376.3
NC_021182:1761789:1770582177058217719971416Clostridium pasteurianum BC1, complete genomeNi,Fe-hydrogenase I large subunit4e-1376.3
NC_014314:1:2040720407219781572Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, completenickel-dependent hydrogenase large subunit6e-1272.4
NC_017192:1933106:1945722194572219470771356Arcobacter sp. L, complete genomeNi/Fe-dependent hydrogenase large subunit2e-1170.9
NC_011830:2940500:2941256294125629428121557Desulfitobacterium hafniense DCB-2, complete genomeHydrogen:quinone oxidoreductase5e-1169.3
NC_015761:1488807:1489501148950114913031803Salmonella bongori NCTC 12419, complete genomeuptake hydrogenase large subunit6e-1169.3
NC_019940:3660754:3660754366075436624841731Thioflavicoccus mobilis 8321 chromosome, complete genomeNi,Fe-hydrogenase I large subunit8e-1168.9
NC_010067:1414000:1432066143206614338681803Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-1168.9
NC_003197:1611302:1611996161199616137981803Salmonella typhimurium LT2, complete genomeputative hydrogenase-1 large subunit6e-1168.9
NC_016856:1621279:1621973162197316237751803Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative hydrogenase-1 large subunit6e-1168.9
NC_013943:2610902:2617104261710426188041701Denitrovibrio acetiphilus DSM 12809 chromosome, complete genomenickel-dependent hydrogenase large subunit6e-1168.9
NC_018515:937994:9546529546529562141563Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi,Fe-hydrogenase I large subunit9e-1168.6
NC_010278:1467146:1488076148807614897851710Actinobacillus pleuropneumoniae serovar 3 str. JL03 chromosome,hydrogenase 2 large subunit1e-1068.2
NC_014541:1165991:1195311119531111970141704Ferrimonas balearica DSM 9799 chromosome, complete genomenickel-dependent hydrogenase large subunit1e-1068.2
NC_007626:1746475:1783667178366717853701704Magnetospirillum magneticum AMB-1, complete genomeNi,Fe-hydrogenase I large subunit1e-1068.2
NC_011353:1195179:1217407121740712192001794Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehydrogenase 1 large subunit1e-1068.2
NC_011745:1055354:1076475107647510782681794Escherichia coli ED1a chromosome, complete genomehydrogenase 1 large subunit1e-1068.2
NC_008701:168662:1860531860531879691917Pyrobaculum islandicum DSM 4184, complete genomenickel-dependent hydrogenase, large subunit1e-1067.8
NC_008687:256692:2842862842862860791794Paracoccus denitrificans PD1222 chromosome 2, complete sequencenickel-dependent hydrogenase, large subunit5e-1066.2
NC_009092:1989977:2015698201569820174041707Shewanella loihica PV-4, complete genomenickel-dependent hydrogenase, large subunit5e-1065.9
NC_017192:1933106:1942487194248719442291743Arcobacter sp. L, complete genomeNi/Fe-hydrogenase large subunit8e-1065.5
NC_011060:1947795:1949804194980419515221719Pelodictyon phaeoclathratiforme BU-1, complete genomenickel-dependent hydrogenase large subunit7e-1065.5
NC_014216:608740:6111626111626126731512Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomenickel-dependent hydrogenase large subunit9e-1065.1
NC_007413:5742406:5750246575024657518411596Anabaena variabilis ATCC 29413, complete genomeNickel-dependent hydrogenase, large subunit1e-0964.7
NC_003198:1463253:1481216148121614830181803Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-0964.7
NC_011059:921690:9367969367969385141719Prosthecochloris aestuarii DSM 271, complete genomenickel-dependent hydrogenase large subunit2e-0964.3
NC_008340:2272692:2281880228188022833281449Alkalilimnicola ehrlichei MLHE-1, complete genomenickel-dependent hydrogenase, large subunit2e-0964.3
NC_010067:1116148:1117491111749111192841794Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-0963.9
NC_013741:838243:8434618434618451851725Archaeoglobus profundus DSM 5631, complete genomenickel-dependent hydrogenase large subunit3e-0963.5
NC_008687:256692:2792912792912807241434Paracoccus denitrificans PD1222 chromosome 2, complete sequencenickel-dependent hydrogenase, large subunit4e-0962.8
NC_007575:1484305:1500993150099315027261734Sulfurimonas denitrificans DSM 1251, complete genomenickel-dependent hydrogenase, large subunit5e-0962.8
NC_012483:3529895:3534810353481035365461737Acidobacterium capsulatum ATCC 51196, complete genomenickel-dependent hydrogenase, large subunit7e-0962.4
NC_003901:2533000:2572533257253325743081776Methanosarcina mazei Go1, complete genomeF420-nonreducing hydrogenase II, large subunit9e-0962
NC_004463:1872537:1890021189002118918111791Bradyrhizobium japonicum USDA 110, complete genomeuptake hydrogenase large subunit homolog7e-0962
NC_017249:8358438:8362679836267983644691791Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein7e-0962
NC_014166:33138:3686436864385281665Arcobacter nitrofigilis DSM 7299 chromosome, complete genomenickel-dependent hydrogenase large subunit1e-0861.6
NC_013851:2610847:2627626262762626294161791Allochromatium vinosum DSM 180 chromosome, complete genomenickel-dependent hydrogenase large subunit2e-0861.2
NC_014836:1180454:1180454118045411821661713Desulfurispirillum indicum S5 chromosome, complete genomenickel-dependent hydrogenase large subunit3e-0860.5
NC_014216:1061265:1073924107392410756241701Desulfurivibrio alkaliphilus AHT2 chromosome, complete genomenickel-dependent hydrogenase large subunit3e-0860.1
NC_013851:2317091:2334118233411823358481731Allochromatium vinosum DSM 180 chromosome, complete genomenickel-dependent hydrogenase large subunit3e-0860.1
NC_007973:1411714:1412448141244814143071860Ralstonia metallidurans CH34 chromosome 1, complete sequencenickel-dependent hydrogenase, large subunit3e-0860.1
NC_011740:2986514:3003102300310230048051704Escherichia fergusonii ATCC 35469, complete genomehydrogenase 2, large subunit3e-0757
NC_009921:4035225:4035225403522540369461722Frankia sp. EAN1pec, complete genomenickel-dependent hydrogenase large subunit3e-0756.6
NC_013894:1288282:1311215131121513128491635Thermocrinis albus DSM 14484 chromosome, complete genomeCytochrome-c3 hydrogenase1e-0654.7
NC_009720:2424975:2434794243479424366081815Xanthobacter autotrophicus Py2, complete genomenickel-dependent hydrogenase large subunit1e-0654.7
NC_015557:30622:4730847308492091902Hydrogenobaculum sp. 3684 chromosome, complete genomeCytochrome-c3 hydrogenase2e-0654.3
NC_015587:28997:4734447344492451902Hydrogenobaculum sp. SHO chromosome, complete genomeCytochrome-c3 hydrogenase2e-0654.3
NC_020411:28995:4734247342492431902Hydrogenobaculum sp. HO, complete genomenickel-dependent hydrogenase large subunit2e-0654.3
NC_018515:3411276:3415156341515634168651710Desulfosporosinus meridiei DSM 13257 chromosome, complete genomeNi,Fe-hydrogenase I large subunit2e-0653.9
NC_015499:352934:3615833615833631451563Thermodesulfobium narugense DSM 14796 chromosome, complete genomeCytochrome-c3 hydrogenase3e-0653.5