Pre_GI: BLASTN Hits

Some Help

Query: NC_010572:7586115 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 7586115, End: 7619551, Length: 33437

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013093:30684863068486311387545390Actinosynnema mirum DSM 43827, complete genome1e-46196BLASTN svgBLASTP svg
NC_013855:19677819677823386637089Azospirillum sp. B510 plasmid pAB510a, complete sequence3e-1695.6BLASTN svgBLASTP svg
NC_008060:306170*30617034178635617Burkholderia cenocepacia AU 1054 chromosome 1, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_008542:855347*85534788974734401Burkholderia cenocepacia HI2424 chromosome 1, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_010508:809974*80997484542135448Burkholderia cenocepacia MC0-3 chromosome 1, complete sequence3e-1075.8BLASTN svgBLASTP svg
NC_006348:2372945*2372945241139038446Burkholderia mallei ATCC 23344 chromosome 1, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_008836:1072721*1072721111116638446Burkholderia mallei NCTC 10229 chromosome II, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_009080:2123987*2123987216243238446Burkholderia mallei NCTC 10247 chromosome II, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_008785:51650051650055172735228Burkholderia mallei SAVP1 chromosome II, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_009076:3179662*3179662321810738446Burkholderia pseudomallei 1106a chromosome I, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_007434:3588081*3588081362652838448Burkholderia pseudomallei 1710b chromosome I, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_009074:3163362*3163362320181038449Burkholderia pseudomallei 668 chromosome I, complete sequence6e-0867.9BLASTN svgBLASTP svg
NC_007510:759905*75990579524835344Burkholderia sp. 383 chromosome 1, complete sequence1e-0663.9BLASTN svgBLASTP svg
NC_007651:2639553*2639553269172452172Burkholderia thailandensis E264 chromosome I, complete sequence2e-0869.9BLASTN svgBLASTP svg
NC_008278:2772726*2772726280322330498Frankia alni ACN14a, complete genome2e-39172BLASTN svgBLASTP svg
NC_009921:57874375787437580894021504Frankia sp. EAN1pec, complete genome5e-24121BLASTN svgBLASTP svg
NC_013440:39770973977097405558678490Haliangium ochraceum DSM 14365, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_013440:10441001044100107126227163Haliangium ochraceum DSM 14365, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_014391:26513152651315269455543241Micromonospora aurantiaca ATCC 27029 chromosome, complete genome4e-46194BLASTN svgBLASTP svg
NC_002945:32462783246278326609919822Mycobacterium bovis AF2122/97, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_002945:18562281856228188073824511Mycobacterium bovis AF2122/97, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_008769:32424533242453326356021108Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_008769:18761091876109190061624508Mycobacterium bovis BCG str. Pasteur 1173P2, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_012207:18480911848091186924521155Mycobacterium bovis BCG str. Tokyo 172, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_012207:32374403237440325728519846Mycobacterium bovis BCG str. Tokyo 172, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_015848:18966601896660192209125432Mycobacterium canettii CIPT 140010059, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_015848:33437313343731336691823188Mycobacterium canettii CIPT 140010059, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_019950:18708631870863189629425432Mycobacterium canettii CIPT 140060008 complete genome4e-1591.7BLASTN svgBLASTP svg
NC_019950:33064193306419333122724809Mycobacterium canettii CIPT 140060008 complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010612:83564883564886299927352Mycobacterium marinum M, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010612:46795944679594471951939926Mycobacterium marinum M, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_002755:18596301859630187892619297Mycobacterium tuberculosis CDC1551, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_002755:32827853282785330371920935Mycobacterium tuberculosis CDC1551, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009565:32999373299937332177021834Mycobacterium tuberculosis F11, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009565:2306574*2306574233169725124Mycobacterium tuberculosis F11, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_009565:18662141866214189074224529Mycobacterium tuberculosis F11, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_009525:33004563300456332228921834Mycobacterium tuberculosis H37Ra, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_009525:18723601872360189686024501Mycobacterium tuberculosis H37Ra, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_000962:18708421870842189534224501Mycobacterium tuberculosis H37Rv, complete genome4e-1591.7BLASTN svgBLASTP svg
NC_000962:32884643288464331029721834Mycobacterium tuberculosis H37Rv, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_020126:55586135558613560639247780Myxococcus stipitatus DSM 14675, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008095:5585346*5585346562741242067Myxococcus xanthus DK 1622, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015690:1818333*18183331947673129341Paenibacillus mucilaginosus KNP414 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009142:45718894571889461144339555Saccharopolyspora erythraea NRRL 2338, complete genome4e-40174BLASTN svgBLASTP svg
NC_019673:6298342*6298342632793229591Saccharothrix espanaensis DSM 44229 complete genome6e-0867.9BLASTN svgBLASTP svg
NC_013947:44133824413382443709923718Stackebrandtia nassauensis DSM 44728 chromosome, complete genome1e-1593.7BLASTN svgBLASTP svg
NC_014623:47887684788768481298824221Stigmatella aurantiaca DW4/3-1 chromosome, complete genome1e-0973.8BLASTN svgBLASTP svg
NC_003155:11378171137817120257364757Streptomyces avermitilis MA-4680, complete genome8e-60240BLASTN svgBLASTP svg
NC_010572:73042907304290735268448395Streptomyces griseus subsp. griseus NBRC 13350, complete genome2e-48202BLASTN svgBLASTP svg
NC_015953:58657335865733590682141089Streptomyces sp. SirexAA-E chromosome, complete genome2e-20109BLASTN svgBLASTP svg
NC_015957:61193466119346619590076555Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-58236BLASTN svgBLASTP svg
NC_015957:42928194292819431625023432Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-41178BLASTN svgBLASTP svg
NC_015957:45464034546403458592939527Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-39172BLASTN svgBLASTP svg
NC_015957:51824605182460522128438825Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_015957:45255804525580455677331194Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-32149BLASTN svgBLASTP svg
NC_015957:60295426029542605506325522Streptomyces violaceusniger Tu 4113 chromosome, complete genome2e-29139BLASTN svgBLASTP svg
NC_013595:47580344758034478379725764Streptosporangium roseum DSM 43021, complete genome4e-0661.9BLASTN svgBLASTP svg