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Query: NC_010572:5445081 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 5445081, End: 5486741, Length: 41661

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015953:26405002640500266269222193Streptomyces sp. SirexAA-E chromosome, complete genome01776BLASTN svgBLASTP svg
NC_021177:27669102766910278672119812Streptomyces fulvissimus DSM 40593, complete genome01116BLASTN svgBLASTP svg
NC_003888:3138905*3138905316269723793Streptomyces coelicolor A3(2), complete genome0898BLASTN svgBLASTP svg
NC_014666:71527827152782717565722876Frankia sp. EuI1c chromosome, complete genome2e-42182BLASTN svgBLASTP svg
NC_003888:31119983111998313627324276Streptomyces coelicolor A3(2), complete genome1e-31147BLASTN svgBLASTP svg
NC_015671:32119723211972325530043329Cellvibrio gilvus ATCC 13127 chromosome, complete genome1e-25127BLASTN svgBLASTP svg
NC_015064:29009072900907292546124555Acidobacterium sp. MP5ACTX9 chromosome, complete genome1e-25127BLASTN svgBLASTP svg
NC_015312:68167868167870428822611Pseudonocardia dioxanivorans CB1190 chromosome, complete genome4e-22115BLASTN svgBLASTP svg
NC_010545:1691999*1691999172113729139Corynebacterium urealyticum DSM 7109, complete genome6e-21111BLASTN svgBLASTP svg
NC_011992:86317486317488672923556Acidovorax ebreus TPSY, complete genome1e-18103BLASTN svgBLASTP svg
NC_014973:1257625*1257625128014722523Geobacter sp. M18 chromosome, complete genome9e-1797.6BLASTN svgBLASTP svg
NC_020064:4751097*4751097477659925503Serratia marcescens FGI94, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_007760:3848190*3848190387276224573Anaeromyxobacter dehalogenans 2CP-C, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_006177:14229321422932144704424113Symbiobacterium thermophilum IAM 14863, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014318:7821227*7821227785959938373Amycolatopsis mediterranei U32 chromosome, complete genome3e-1385.7BLASTN svgBLASTP svg
NC_008278:256427*25642728240725981Frankia alni ACN14a, complete genome1e-1283.8BLASTN svgBLASTP svg
NC_013595:18512261851226187265321428Streptosporangium roseum DSM 43021, complete genome5e-1281.8BLASTN svgBLASTP svg
NC_014314:23804323804328361945577Dehalogenimonas lykanthroporepellens BL-DC-9 chromosome, complete5e-1281.8BLASTN svgBLASTP svg
NC_019673:8581000*8581000860834127342Saccharothrix espanaensis DSM 44229 complete genome8e-1177.8BLASTN svgBLASTP svg
NC_003888:4251867*4251867430640654540Streptomyces coelicolor A3(2), complete genome8e-1177.8BLASTN svgBLASTP svg
NC_014958:629459*62945965461225154Deinococcus maricopensis DSM 21211 chromosome, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_010424:1563033*1563033159550932477Candidatus Desulforudis audaxviator MP104C, complete genome3e-1075.8BLASTN svgBLASTP svg
NC_015690:73347867334786735842623641Paenibacillus mucilaginosus KNP414 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_014363:1902868*1902868192872325856Olsenella uli DSM 7084 chromosome, complete genome5e-0971.9BLASTN svgBLASTP svg
NC_014039:1766049*1766049178641920371Propionibacterium acnes SK137 chromosome, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_018750:3988196*3988196400732519130Streptomyces venezuelae ATCC 10712, complete genome2e-0869.9BLASTN svgBLASTP svg
NC_018870:427357*42735744729619940Thermacetogenium phaeum DSM 12270 chromosome, complete genome8e-0867.9BLASTN svgBLASTP svg
NC_014532:3967463*3967463399309925637Halomonas elongata DSM 2581, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_006087:88576088576091259926840Leifsonia xyli subsp. xyli str. CTCB07, complete genome3e-0765.9BLASTN svgBLASTP svg
NC_021177:4041915*4041915406445922545Streptomyces fulvissimus DSM 40593, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_010572:83524628352462839090038439Streptomyces griseus subsp. griseus NBRC 13350, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_008027:23316172331617235762526009Pseudomonas entomophila L48, complete genome1e-0663.9BLASTN svgBLASTP svg
NC_018720:45728945728947721319925Bifidobacterium asteroides PRL2011 chromosome, complete genome5e-0661.9BLASTN svgBLASTP svg
NC_010557:31600031600033917223173Burkholderia ambifaria MC40-6 chromosome 3, complete sequence5e-0661.9BLASTN svgBLASTP svg