Pre_GI: BLASTP Hits

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Query: NC_010572:8408500:8447632 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 8447632, End: 8450145, Length: 2514

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:82000:9578595785982982514Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein01589
NC_016114:1:91179117106791563Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehelix-turn-helix domain-containing protein1e-1275.9
NC_016582:2009588:2030500203050020320411542Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative acyltransferase1e-0966.2
NC_013525:1953920:1955684195568419570241341Thermobaculum terrenum ATCC BAA-798 chromosome 1, complete genomereplicative DNA helicase3e-0758.2
NC_004369:2968251:2998493299849330000761584Corynebacterium efficiens YS-314, complete genomereplicative DNA helicase2e-0655.5
NC_013174:2321000:2336936233693623382191284Jonesia denitrificans DSM 20603, complete genomeDnaB domain protein helicase domain protein6e-0653.5
NC_013174:2455420:2470469247046924717521284Jonesia denitrificans DSM 20603, complete genomeDnaB domain protein helicase domain protein6e-0653.5