Pre_GI: BLASTP Hits

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Query: NC_010572:8408500:8441198 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 8441198, End: 8442106, Length: 909

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:82000:103824103824104732909Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative ATP/GTP-binding protein3e-169594
NC_015953:4045500:4051641405164140526931053Streptomyces sp. SirexAA-E chromosome, complete genomeTniB family protein1e-63243
NC_009338:3410349:3415116341511634161441029Mycobacterium gilvum PYR-GCK chromosome, complete genomeATP/GTP-binding protein2e-53209
NC_013929:3660321:3666607366660736676591053Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein4e-52205
NC_014814:2588628:2601600260160026026131014Mycobacterium sp. Spyr1 chromosome, complete genomeTniB protein4e-52205
NC_009338:3359500:3363869336386933648821014Mycobacterium gilvum PYR-GCK chromosome, complete genomeputative ATP/GTP-binding protein4e-52205
NC_009338:630130:6350076350076360201014Mycobacterium gilvum PYR-GCK chromosome, complete genomeATP/GTP-binding protein4e-52205
NC_016943:1442885:1451556145155614526231068Blastococcus saxobsidens DD2, complete genomehypothetical protein6e-51201
NC_014814:2588628:2623626262362626246631038Mycobacterium sp. Spyr1 chromosome, complete genomeTniB protein1e-36153
NC_015859:1589707:1599703159970316007521050Corynebacterium variabile DSM 44702 chromosome, complete genomehypothetical protein4e-34145
NC_016907:152500:159768159768160730963Gordonia polyisoprenivorans VH2 plasmid p174, complete sequenceputative ATP-binding protein2e-21103
NC_013441:5025444:5046385504638550474491065Gordonia bronchialis DSM 43247, complete genomehypothetical protein3e-21102
NC_017904:1683471:1697144169714416981481005Mycobacterium sp. MOTT36Y chromosome, complete genomehypothetical protein8e-1787.8
NC_009339:149805:1526431526431538241182Mycobacterium gilvum PYR-GCK plasmid pMFLV01, complete sequenceATPase AAA2e-1583.2
NC_016109:8761557:8760478876047887615601083Kitasatospora setae KM-6054, complete genomehypothetical protein2e-1376.6
NC_009338:912894:9265409265409276611122Mycobacterium gilvum PYR-GCK chromosome, complete genomehypothetical protein4e-1272.4
NC_014814:5422972:5459623545962354607441122Mycobacterium sp. Spyr1 chromosome, complete genomehypothetical protein5e-1272
NC_013595:3952196:3964144396414439654151272Streptosporangium roseum DSM 43021, complete genomehypothetical protein5e-1168.6
NC_016111:2912962:2928975292897529302581284Streptomyces cattleya NRRL 8057, complete genomehypothetical protein6e-1168.6
NC_014659:4908182:493107849310784931842765Rhodococcus equi 103S, complete genomehypothetical protein3e-0962.8
NC_016002:1975000:199457619945761995505930Pseudogulbenkiania sp. NH8B, complete genomeTniB family protein1e-0757.4
NC_016901:2594942:261346526134652614379915Shewanella baltica OS678 chromosome, complete genomeTniB family protein2e-0653.1
NC_009997:2635025:265354826535482654462915Shewanella baltica OS195, complete genomeAAA ATPase2e-0653.1
NC_010322:1:107831078311742960Pseudomonas putida GB-1 chromosome, complete genomeAAA ATPase8e-0651.6
NC_002947:8394:191631916320122960Pseudomonas putida KT2440, complete genomeGTP-binding protein, putative8e-0651.6
NC_009512:1:100011000110960960Pseudomonas putida F1, complete genomeAAA ATPase8e-0651.6
NC_010501:1:100211002110980960Pseudomonas putida W619, complete genomeAAA ATPase8e-0651.6