Pre_GI: BLASTP Hits

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Query: NC_010572:8408500:8408590 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 8408590, End: 8408976, Length: 387

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010572:82000:861518615186822672Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein3e-41167
NC_003903:260796:264803264803265462660Streptomyces coelicolor A3(2) plasmid SCP1, complete sequenceputative secreted protein4e-28123
NC_018524:4656786:466458246645824665229648Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehypothetical protein4e-22103
NC_013093:1213908:121661212166121217259648Actinosynnema mirum DSM 43827, complete genomehypothetical protein2e-2097.4
NC_016582:10159486:101775041017750410178073570Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative secreted protein5e-1993.2
NC_008711:3520515:3526048352604835273191272Arthrobacter aurescens TC1, complete genomeputative S-layer domain protein1e-1684.7
NC_018531:3679978:3680569368056936820801512Arthrobacter sp. Rue61a chromosome, complete genomeS-layer domain protein3e-1684
NC_016935:4233223:429943842994384300070633Paenibacillus mucilaginosus 3016 chromosome, complete genomesecreted protein2e-1580.9
NC_015690:4469775:454313245431324543764633Paenibacillus mucilaginosus KNP414 chromosome, complete genomesecreted protein3e-1580.5
NC_008699:2418722:242572924257292426367639Nocardioides sp. JS614, complete genomesecreted protein2e-1478.2
NC_016582:10104458:101324131013241310132964552Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein3e-1477.4
NC_014830:335380:3522053522053539561752Intrasporangium calvum DSM 43043 chromosome, complete genomeDomain of unknown function DUF19941e-1375.1
NC_014150:582093:589376589376589969594Brachyspira murdochii DSM 12563 chromosome, complete genomeDomain of unknown function DUF19943e-1270.5
NC_003903:260796:265459265459265794336Streptomyces coelicolor A3(2) plasmid SCP1, complete sequencehypothetical protein6e-1269.7
NC_018750:2270314:227031422703142270964651Streptomyces venezuelae ATCC 10712, complete genomeputative secreted protein2e-1168.2
NC_014815:6616500:663867266386726639346675Micromonospora sp. L5 chromosome, complete genomehypothetical protein5e-1166.6
NC_014815:2055286:206501120650112065682672Micromonospora sp. L5 chromosome, complete genomehypothetical protein2e-0961.2
NC_014391:1967167:200182320018232002494672Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein3e-0960.8
NC_020302:1241504:127053812705381271194657Corynebacterium halotolerans YIM 70093 = DSM 44683, completehypothetical protein4e-0960.5
NC_014246:1579811:159682815968281597691864Mobiluncus curtisii ATCC 43063 chromosome, complete genomehypothetical protein6e-0959.3
NC_007491:53723:733797337974131753Rhodococcus erythropolis PR4 plasmid pREL1, complete sequencehypothetical protein2e-0857.8
NC_015957:9801884:982107598210759821767693Streptomyces violaceusniger Tu 4113 chromosome, complete genomehypothetical protein4e-0857
NC_014803:709000:713160713160713894735Pseudoalteromonas sp. SM9913 chromosome chromosome I, completehypothetical protein5e-0856.6
NC_009453:36599:442744427444576303Arthrobacter sp. Rue61a plasmid pAL1, complete sequencehypothetical protein4e-0753.5
NC_017303:863060:863060863060863644585Corynebacterium pseudotuberculosis I19 chromosome, complete genomehypothetical protein1e-0652
NC_016781:844613:863240863240863824585Corynebacterium pseudotuberculosis 3/99-5 chromosome, completehypothetical protein1e-0652
NC_014329:844622:863249863249863833585Corynebacterium pseudotuberculosis FRC41 chromosome, completehypothetical protein1e-0652
NC_017305:863072:863072863072863812741Corynebacterium pseudotuberculosis PAT10 chromosome, completehypothetical protein1e-0652
NC_017031:863093:863093863093863833741Corynebacterium pseudotuberculosis P54B96 chromosome, completehypothetical protein1e-0652
NC_011593:507438:511030511030511773744Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,hypothetical protein2e-0651.6
NC_017219:508500:510823510823511566744Bifidobacterium longum subsp. infantis ATCC 15697, complete genomehypothetical protein2e-0651.6
NC_018532:166468:209819209819210607789Arthrobacter sp. Rue61a plasmid p232, complete sequenceexcalibur domain-containing protein1e-0651.6
NC_016932:832748:851363851363851947585Corynebacterium pseudotuberculosis 316 chromosome, complete genomehypothetical protein2e-0651.2
NC_014656:1161188:119435511943551195098744Bifidobacterium longum subsp. longum BBMN68 chromosome, completehypothetical protein2e-0651.2
NC_014616:462000:463931463931464608678Bifidobacterium bifidum S17 chromosome, complete genomehypothetical protein3e-0650.4
NC_014644:1456689:148138114813811482118738Gardnerella vaginalis ATCC 14019 chromosome, complete genomeextracellular deoxyribonuclease5e-0650.1
NC_014550:301894:302283302283302984702Arthrobacter arilaitensis Re117, complete genomehypothetical protein6e-0649.7
NC_013174:373726:390695390695391417723Jonesia denitrificans DSM 20603, complete genomehypothetical protein6e-0649.7
NC_016800:979494:998797998797999387591Corynebacterium diphtheriae BH8 chromosome, complete genomehypothetical protein5e-0649.7
NC_014215:421683:435942435942436691750Propionibacterium freudenreichii subsp. shermanii CIRM-BIA1,Hypothetical secreted protein7e-0649.3
NC_008618:1729739:175995617599561760708753Bifidobacterium adolescentis ATCC 15703, complete genomehypothetical protein9e-0648.9