Pre_GI: BLASTP Hits

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Query: NC_010572:8352462:8384268 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 8384268, End: 8390900, Length: 6633

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:2241647:2249173224917322557036531Streptomyces fulvissimus DSM 40593, complete genomeYD repeat protein01612
NC_010572:8493946:77227722141386417Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein01097
NC_010572:8493946:8531792853179285382086417Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein01097
NC_010572:1:77227722141386417Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein01097
NC_013093:5791961:5799746579974658066186873Actinosynnema mirum DSM 43827, complete genomeYD repeat protein0900
NC_014815:1490957:1494626149462615014176792Micromonospora sp. L5 chromosome, complete genomeyd repeat-containing protein0860
NC_014391:1226922:1230591123059112373376747Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein0857
NC_013929:4549988:4570978457097845773856408Streptomyces scabiei 87.22 chromosome, complete genomeligand-binding protein0852
NC_009380:1177316:1194880119488012017406861Salinispora tropica CNB-440 chromosome, complete genomeYD repeat-containing protein0814
NC_018524:4599809:4619731461973146257336003Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeRHS repeat-associated core domain protein0805
NC_016109:1305368:1309850130985013168697020Kitasatospora setae KM-6054, complete genomehypothetical protein0792
NC_018524:5748421:5761760576176057682066447Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeRHS repeat-associated core domain protein0788
NC_014318:6108633:6117880611788061247676888Amycolatopsis mediterranei U32 chromosome, complete genomeRHS repeat-containing protein0781
NC_017186:6108676:6117923611792361248106888Amycolatopsis mediterranei S699 chromosome, complete genomeRHS repeat-containing protein0781
NC_014210:4188448:4196635419663542030726438Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,YD repeat protein0775
NC_003903:260796:2710602710602773086249Streptomyces coelicolor A3(2) plasmid SCP1, complete sequenceputative large secreted protein0775
NC_016109:1445369:1451556145155614588397284Kitasatospora setae KM-6054, complete genomehypothetical protein0682
NC_019673:2185005:2200555220055522068966342Saccharothrix espanaensis DSM 44229 complete genomeRHS repeat-containing protein0671
NC_016109:3364844:3372371337237133795437173Kitasatospora setae KM-6054, complete genomehypothetical protein0663
NC_009380:4184695:4193635419363541996586024Salinispora tropica CNB-440 chromosome, complete genomeYD repeat-containing protein0654
NC_016109:4199839:4227504422750442347277224Kitasatospora setae KM-6054, complete genomehypothetical protein0647
NC_013929:3986272:3992523399252339997947272Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-168594
NC_003155:320979:3294523294523365467095Streptomyces avermitilis MA-4680, complete genomelarge secreted protein5e-141503
NC_021177:6954675:6960817696081769687187902Streptomyces fulvissimus DSM 40593, complete genomeYD repeat protein1e-133479
NC_009953:1484000:1484050148405014918977848Salinispora arenicola CNS-205 chromosome, complete genomeYD repeat-containing protein7e-127456
NC_014815:6576983:6583940658394065908276888Micromonospora sp. L5 chromosome, complete genomeyd repeat protein7e-98360
NC_003155:210240:2298252298252369377113Streptomyces avermitilis MA-4680, complete genomelarge secreted protein2e-78295
NC_013131:3473843:3488227348822734958557629Catenulispora acidiphila DSM 44928, complete genomeYD repeat protein6e-69264
NC_016111:581143:6094546094546115682115Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-34149
NC_014830:3156873:3168566316856631705962031Intrasporangium calvum DSM 43043 chromosome, complete genomeYD repeat protein2e-27126
NC_017186:6108676:611570361157036116245543Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein2e-21106
NC_014318:6108633:611566061156606116202543Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein2e-21106
NC_002936:1319266:1326822132682213323265505Dehalococcoides ethenogenes 195, complete genomeNHL/RHS/YD repeat protein5e-21105
NC_015953:1860946:1868325186832518709192595Streptomyces sp. SirexAA-E chromosome, complete genome9e-1997.8
NC_010162:10676864:1068574910685749106924026654Sorangium cellulosum 'So ce 56', complete genomehypothetical protein4e-1792.4
NC_007954:138410:1538731538731613667494Shewanella denitrificans OS217, complete genomeIntegrins alpha chain2e-1690.1
NC_009784:2129069:2145912214591221531987287Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequencehypothetical protein3e-1689.4
NC_011979:1128986:1135225113522511392714047Geobacter sp. FRC-32, complete genomeYD repeat protein1e-1484.3
NC_017030:5785681:5790705579070557970856381Corallococcus coralloides DSM 2259 chromosome, complete genomehypothetical protein2e-1483.6
NC_016627:1723104:1755569175556917598014233Clostridium clariflavum DSM 19732 chromosome, complete genome4e-1482.4
NC_011979:4062000:4075522407552240787373216Geobacter sp. FRC-32, complete genomeYD repeat protein1e-1277.4
NC_016791:2888319:2900361290036129086378277Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-1277
NC_016627:1723104:1728338172833817372628925Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein4e-1275.5
NC_011979:4062000:4071464407146440736232160Geobacter sp. FRC-32, complete genomeYD repeat protein2e-1173.6
NC_004460:1313468:1321919132191913278495931Vibrio vulnificus CMCP6 chromosome II, complete sequenceRhs family protein3e-1172.4
NC_016791:2888319:2896432289643228994403009Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein5e-1172
NC_019940:1932906:1941658194165819458364179Thioflavicoccus mobilis 8321 chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-1069.7
NC_011979:4062000:4081438408143840853043867Geobacter sp. FRC-32, complete genomeYD repeat-containing protein3e-1069.3
NC_003919:1491001:1498356149835615019553600Xanthomonas axonopodis pv. citri str. 306, complete genomewall-associated protein4e-1068.9
NC_009455:173374:178952178952179650699Dehalococcoides sp. BAV1 chromosome, complete genomehypothetical protein5e-1068.6
NC_016791:3851454:38636243863624387462411001Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein7e-1068.2
NC_003552:2502689:2534487253448725411406654Methanosarcina acetivorans C2A, complete genomehypothetical protein7e-1068.2
NC_015947:280095:2889822889822927343753Burkholderia sp. JV3 chromosome, complete genomeRHS repeat-associated core domain-containing protein2e-0967
NC_015953:4908069:4916907491690749221445238Streptomyces sp. SirexAA-E chromosome, complete genomeYD repeat-containing protein2e-0966.6
NC_009483:1448552:1462966146296614648521887Geobacter uraniireducens Rf4 chromosome, complete genomeYD repeat-containing protein2e-0966.6
NC_016791:2888319:2892884289288428955412658Clostridium sp. BNL1100 chromosome, complete genomeRHS repeat-associated core domain-containing protein3e-0966.2
NC_014507:1610409:1610409161040916144524044Methanoplanus petrolearius DSM 11571 chromosome, complete genomeYD repeat protein4e-0965.9
NC_007912:4125970:4139754413975441472957542Saccharophagus degradans 2-40, complete genomeRhs family protein-like4e-0965.5
NC_011071:10842:2076920769229852217Stenotrophomonas maltophilia R551-3, complete genomeYD repeat protein5e-0965.5
NC_010162:9727465:97442389744238975450910272Sorangium cellulosum 'So ce 56', complete genomeRhsA protein precursor6e-0965.1
NC_020541:2850831:285737228573722858283912Rhodanobacter sp. 2APBS1, complete genomeRHS repeat-associated core domain protein7e-0965.1
NC_010506:1835910:1841082184108218422571176Shewanella woodyi ATCC 51908, complete genomehypothetical protein8e-0964.7
NC_007355:4358074:4358074435807443643646291Methanosarcina barkeri str. fusaro chromosome 1, complete sequencehypothetical protein1e-0863.9
NC_015563:313283:3224023224023234331032Delftia sp. Cs1-4 chromosome, complete genomeRHS repeat-associated core domain-containing protein3e-0862.8
NC_016631:5378810:5384900538490053912356336Granulicella mallensis MP5ACTX8 chromosome, complete genomeRHS repeat-associated core domain-containing protein3e-0862.8
NC_010162:10894592:1090663210906632109160819450Sorangium cellulosum 'So ce 56', complete genomeRhs family carbohydrate-binding protein4e-0862.4
NC_018691:1864796:1897263189726319044537191Alcanivorax dieselolei B5 chromosome, complete genomeRhs family protein7e-0861.6
NC_018524:4599809:4625684462568446268801197Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomeYD repeat-containing domain protein8e-0861.2
NC_013510:3032114:3042885304288530454872603Thermomonospora curvata DSM 43183, complete genome9e-0861.2
NC_016627:1342172:1349492134949213558876396Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-0760.8
NC_016631:2051475:2063288206328820696266339Granulicella mallensis MP5ACTX8 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-0760.8
NC_019673:2257259:2257259225725922666309372Saccharothrix espanaensis DSM 44229 complete genomeConserved carbohydrate-binding protein1e-0760.5
NC_011566:1016858:103128210312821031830549Shewanella piezotolerans WP3, complete genomeYD repeat protein2e-0760.1
NC_010995:671389:6787986787986859977200Cellvibrio japonicus Ueda107, complete genomecarbohydrate binding protein, putative, cbp35B2e-0760.1
NC_020829:5382500:538912653891265390046921Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein2e-0760.1
NC_015276:3321277:3332172333217233333231152Marinomonas mediterranea MMB-1 chromosome, complete genomeRHS repeat-associated core domain3e-0759.7
NC_008095:8198970:8206615820661582160559441Myxococcus xanthus DK 1622, complete genomehypothetical protein3e-0759.7
NC_007954:138410:1467831467831483451563Shewanella denitrificans OS217, complete genomehypothetical protein2e-0759.7
NC_010674:1672990:1682959168295916908637905Clostridium botulinum B str. Eklund 17B, complete genomeYD repeat containing protein2e-0759.7
NC_013722:2784000:279629527962952797293999Xanthomonas albilineans, complete genomehypothetical protein4e-0758.9
NC_016830:2168523:217960121796012180500900Pseudomonas fluorescens F113 chromosome, complete genomeRHS repeat-associated core domain-containing protein4e-0758.9
NC_014228:2883500:2912494291249429138461353Xenorhabdus nematophila ATCC 19061, complete genomehypothetical protein4e-0758.9
NC_020541:2850831:2859185285918528602401056Rhodanobacter sp. 2APBS1, complete genomeRHS repeat-associated core domain protein5e-0758.5
NC_009997:5188221:520242052024205203316897Shewanella baltica OS195, complete genomehypothetical protein8e-0758.2
NC_009665:5072413:508529350852935086189897Shewanella baltica OS185 chromosome, complete genomehypothetical protein8e-0758.2
NC_016901:5130147:514304251430425143938897Shewanella baltica OS678 chromosome, complete genomeYD repeat-containing protein8e-0758.2
NC_015711:3193774:3203507320350732105297023Myxococcus fulvus HW-1 chromosome, complete genomehypothetical protein7e-0758.2
NC_011663:4943179:496454749645474965497951Shewanella baltica OS223 chromosome, complete genomehypothetical protein9e-0757.8
NC_015311:145215:1466711466711559049234Prevotella denticola F0289 chromosome, complete genomeRHS repeat-associated core domain-containing protein9e-0757.8
NC_009012:1:1255512555180775523Clostridium thermocellum ATCC 27405, complete genomeYD repeat containing protein1e-0657.4
NC_016593:3116145:3122850312285031285165667Geobacillus thermoleovorans CCB_US3_UF5 chromosome, completehypothetical protein1e-0657.4
NC_016627:1723104:1751383175138317533501968Clostridium clariflavum DSM 19732 chromosome, complete genomeRHS repeat-associated core domain-containing protein1e-0657.4
NC_008322:4611000:4622187462218746290386852Shewanella sp. MR-7, complete genomeYD repeat protein2e-0657
NC_003552:2502689:2532488253248825338101323Methanosarcina acetivorans C2A, complete genomehypothetical protein2e-0657
NC_014228:2883500:2914873291487329206655793Xenorhabdus nematophila ATCC 19061, complete genomeputative Rhs family protein2e-0656.6
NC_020410:3715210:3723300372330037302596960Bacillus amyloliquefaciens subsp. plantarum UCMB5036 completecell wall-associated protein precursor2e-0656.6
NC_009973:178000:2033322033322104567125Herpetosiphon aurantiacus ATCC 23779 plasmid pHAU01, completeYD repeat-containing protein2e-0656.6
NC_014393:4352216:4360346436034643624272082Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein4e-0655.8
NC_014972:1621850:1639704163970416464836780Desulfobulbus propionicus DSM 2032 chromosome, complete genomeYD repeat-containing protein5e-0655.5
NC_012491:1838432:1846237184623718516275391Brevibacillus brevis NBRC 100599, complete genomehypothetical protein5e-0655.5
NC_011145:4365730:4378717437871743843565640Anaeromyxobacter sp. K, complete genomeYD repeat protein7e-0655.1
NC_019842:3755275:3769085376908537761167032Bacillus amyloliquefaciens subsp. plantarum AS43.3 chromosome,wall-associated protein7e-0655.1
NC_011145:1494521:1500542150054215075947053Anaeromyxobacter sp. K, complete genomeYD repeat protein9e-0654.7
NC_010729:2038118:2049047204904720504441398Porphyromonas gingivalis ATCC 33277, complete genomehypothetical protein9e-0654.7
NC_019892:429975:4514424514424597008259Singulisphaera acidiphila DSM 18658 chromosome, complete genomeRHS repeat-associated core domain-containing protein9e-0654.7
NC_011567:2468708:2479021247902124807121692Anoxybacillus flavithermus WK1, complete genomeRhs family protein8e-0654.7
NC_014393:4352216:43633464363346437395010605Clostridium cellulovorans 743B chromosome, complete genomehypothetical protein8e-0654.7
NC_014963:113015:1130151130151190085994Terriglobus saanensis SP1PR4 chromosome, complete genomeYD repeat-containing protein7e-0654.7
NC_016631:773511:7781187781187837995682Granulicella mallensis MP5ACTX8 chromosome, complete genomeRHS repeat-associated core domain-containing protein7e-0654.7
NC_002939:47406:5392553925602786354Geobacter sulfurreducens PCA, complete genomesalmonella virulence plasmid 65kDa B protein /YD repeat protein9e-0654.3