Pre_GI: BLASTP Hits

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Query: NC_010572:8352462:8369771 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 8369771, End: 8370325, Length: 555

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008537:12500:2948329483306761194Arthrobacter sp. FB24 plasmid 1, complete sequencetransposase IS116/IS110/IS902 family protein1e-39162
NC_002944:2373873:2388971238897123901911221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein6e-38156
NC_002944:1881405:1882374188237418835941221Mycobacterium avium subsp. paratuberculosis K-10, complete genomehypothetical protein6e-38156
NC_016582:10159486:102085631020856310209084522Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative transposase9e-35146
NC_014666:1844882:1861075186107518622711197Frankia sp. EuI1c chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-34145
NC_014666:1601972:1613788161378816149841197Frankia sp. EuI1c chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-34145
NC_016111:2952338:2959354295935429605501197Streptomyces cattleya NRRL 8057, complete genomehypothetical protein9e-34142
NC_003155:210240:2435812435812447711191Streptomyces avermitilis MA-4680, complete genomeIS110 family transposase1e-32139
NC_015145:2693749:2712406271240627136081203Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometransposase8e-33139
NC_016582:10326938:1033242710332427103336231197Streptomyces bingchenggensis BCW-1 chromosome, complete genomeIS116/IS110/IS902 family transposase9e-32136
NC_010612:4654936:4671921467192146731261206Mycobacterium marinum M, complete genometransposase1e-31135
NC_015312:61752:7224072240734421203Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS116/IS110/IS902 family protein2e-31135
NC_015312:1265797:1280848128084812820591212Pseudonocardia dioxanivorans CB1190 chromosome, complete genometransposase IS111A/IS1328/IS15332e-31134
NC_006087:2326143:2327614232761423288161203Leifsonia xyli subsp. xyli str. CTCB07, complete genometransposase, undefined2e-30132
NC_013441:2788806:2820958282095828221811224Gordonia bronchialis DSM 43247, complete genometransposase IS111A/IS1328/IS15332e-26118
NC_013929:3722867:3749514374951437506591146Streptomyces scabiei 87.22 chromosome, complete genometransposase6e-26117
NC_019673:2051363:2139699213969921409161218Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-25115
NC_014158:233733:2820262820262832401215Tsukamurella paurometabola DSM 20162 chromosome, complete genometransposase IS116/IS110/IS902 family protein3e-25114
NC_015859:1536439:155599215559921556978987Corynebacterium variabile DSM 44702 chromosome, complete genometransposase for insertion sequence element5e-22103
NC_008703:31500:3294732947341521206Mycobacterium sp. KMS plasmid pMKMS01, complete sequencetransposase IS116/IS110/IS902 family protein2e-21102
NC_014811:166389:1674631674631686681206Mycobacterium sp. Spyr1 plasmid pMSPYR101, complete sequencetransposase2e-21102
NC_008703:31500:4552345523467281206Mycobacterium sp. KMS plasmid pMKMS01, complete sequencetransposase IS116/IS110/IS902 family protein2e-21102
NC_002944:4163490:4183576418357641847841209Mycobacterium avium subsp. paratuberculosis K-10, complete genomeIS1110 transposase1e-2099
NC_014218:1163513:1178727117872711799261200Arcanobacterium haemolyticum DSM 20595 chromosome, complete genometransposase IS116/IS110/IS902 family protein1e-1376.3
NC_012586:425615:4426694426694438471179Rhizobium sp. NGR234 plasmid pNGR234b, complete sequenceputative transposase for insertion sequence NGRIS-14a3e-1374.7
NC_018583:95388:985769857699028453Gordonia sp. KTR9 plasmid pGKT3, complete sequenceTransposase-like protein3e-1271.6
NC_015145:3657103:3677666367766636788651200Arthrobacter phenanthrenivorans Sphe3 chromosome, complete genometransposase9e-1269.7
NC_016111:1904859:1908978190897819102791302Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-1168.9
NC_013131:3473843:3476181347618134773801200Catenulispora acidiphila DSM 44928, complete genometransposase IS116/IS110/IS902 family protein3e-1168.2
NC_003888:8594500:8609130860913086103471218Streptomyces coelicolor A3(2), complete genomeprobable IS110 transposase3e-1168.2
NC_003888:7028165:7057809705780970590261218Streptomyces coelicolor A3(2), complete genomeIS110 transposase/integrase3e-1168.2
NC_013929:1584906:1597557159755715987591203Streptomyces scabiei 87.22 chromosome, complete genometransposase3e-1167.8
NC_016787:733685:7510667510667522741209Corynebacterium diphtheriae HC03 chromosome, complete genometransposase-like protein1e-1066.2
NC_016799:731849:7454017454017466091209Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein1e-1065.9
NC_007164:1839154:1859120185912018603281209Corynebacterium jeikeium K411, complete genometransposase for IS3512c2e-1065.5
NC_012803:1302261:1311276131127613125021227Micrococcus luteus NCTC 2665, complete genometransposase3e-1065.1
NC_015673:525638:5298365298365310441209Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element3e-1064.7
NC_008537:12500:1657316573178381266Arthrobacter sp. FB24 plasmid 1, complete sequencetransposase, IS111A/IS1328/IS15337e-1063.5
NC_014391:4617688:4619787461978746210101224Micromonospora aurantiaca ATCC 27029 chromosome, complete genometransposase IS116/IS110/IS902 family protein6e-0960.5
NC_007164:622000:6289516289516301621212Corynebacterium jeikeium K411, complete genometransposase for IS3510d1e-0859.7
NC_009142:5647737:564935756493575649965609Saccharopolyspora erythraea NRRL 2338, complete genomeputative IS110 transposase/integrase2e-0858.9
NC_015673:2206881:2212642221264222138561215Corynebacterium resistens DSM 45100 chromosome, complete genometransposase for insertion sequence element2e-0858.9
NC_016787:1782951:179752217975221797899378Corynebacterium diphtheriae HC03 chromosome, complete genometransposase-like protein2e-0858.5
NC_016802:1815098:183281618328161833145330Corynebacterium diphtheriae HC02 chromosome, complete genometransposase-like protein3e-0858.5
NC_009142:2725000:2743012274301227442291218Saccharopolyspora erythraea NRRL 2338, complete genometransposase IS116/IS110/IS902 family protein4e-0857.8
NC_016799:731849:748118748118748507390Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein1e-0756.2
NC_010658:1772994:1785651178565117868471197Shigella boydii CDC 3083-94, complete genometransposase1e-0755.8
NC_010660:86445:9314693146943421197Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencetransposase1e-0755.8
NC_007607:87000:1224321224321236281197Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceISSfl2 ORF1e-0755.8
NC_007384:1763375:177004517700451770461417Shigella sonnei Ss046, complete genomeISSfl2 ORF2e-0755.5
NC_008253:3941938:3987475398747539886711197Escherichia coli 536, complete genomeputative transposase3e-0755.1
NC_016790:1758000:177197217719721772301330Corynebacterium diphtheriae VA01 chromosome, complete genometransposase-like protein3e-0755.1
NC_016788:1785287:179959917995991799928330Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein3e-0755.1
NC_008258:1934479:1935527193552719367231197Shigella flexneri 5 str. 8401, complete genomeISSfl2 ORF5e-0754.3
NC_007434:1322500:1349622134962213509381317Burkholderia pseudomallei 1710b chromosome I, complete sequenceTransposase7e-0753.5
NC_010804:2206000:2216716221671622179211206Burkholderia multivorans ATCC 17616 chromosome 1, completeISBmu10 transposase7e-0753.5
NC_010087:319063:3418413418413430461206Burkholderia multivorans ATCC 17616 chromosome 3, completetransposase IS116/IS110/IS902 family protein7e-0753.5
NC_010801:550270:5818125818125830171206Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu10 transposase7e-0753.5
NC_010084:1299387:1306852130685213080571206Burkholderia multivorans ATCC 17616 chromosome 1, completetransposase IS116/IS110/IS902 family protein7e-0753.5
NC_008060:2913671:2927028292702829282901263Burkholderia cenocepacia AU 1054 chromosome 1, complete sequencetransposase IS116/IS110/IS9026e-0753.5
NC_007517:3344799:336274733627473363703957Geobacter metallireducens GS-15, complete genomeIS111A/IS1328/IS1533/IS116/IS110/IS902 transposase1e-0652.8
NC_007517:3151742:317607231760723177028957Geobacter metallireducens GS-15, complete genomeIS111A/IS1328/IS1533/IS116/IS110/IS902 transposase1e-0652.8
NC_008271:119957:1199571199571211321176Rhodococcus sp. RHA1 plasmid pRHL3, complete sequenceprobable transposase3e-0651.6
NC_007952:3196085:3195026319502631962311206Burkholderia xenovorans LB400 chromosome 2, complete sequenceputative transposase5e-0650.8
NC_007951:1928906:194963619496361950214579Burkholderia xenovorans LB400 chromosome 1, complete sequence6e-0650.4