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Query: NC_010572:8352462:8359316 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 8359316, End: 8360623, Length: 1308

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016582:3763476:377374537737453774215471Streptomyces bingchenggensis BCW-1 chromosome, complete genomeregulatory protein7e-0962.4
NC_015957:7249873:726567072656707266197528Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-0861.6
NC_013093:3768790:377299837729983773411414Actinosynnema mirum DSM 43827, complete genomeputative anti-sigma regulatory factor, serine/threonine protein kinase5e-0859.3
NC_016109:5768000:580196058019605802550591Kitasatospora setae KM-6054, complete genomehypothetical protein1e-0757.8
NC_016111:2952338:295743429574342958006573Streptomyces cattleya NRRL 8057, complete genomehypothetical protein2e-0654.3
NC_003888:4927170:496064949606494961074426Streptomyces coelicolor A3(2), complete genomehypothetical protein2e-0654.3
NC_013929:3600343:362454136245413624975435Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein3e-0653.9
NC_016111:3659269:367122436712243671643420Streptomyces cattleya NRRL 8057, complete genomehypothetical protein3e-0653.5
NC_016113:887582:896879896879897598720Streptomyces cattleya NRRL 8057 plasmid pSCAT, complete sequencehypothetical protein5e-0652.8
NC_018750:6588206:660790366079036608355453Streptomyces venezuelae ATCC 10712, complete genomeprobable regulatory protein6e-0652.8
NC_013595:8338619:834591383459138346320408Streptosporangium roseum DSM 43021, complete genome7e-0652.4