Pre_GI: BLASTP Hits

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Query: NC_010572:8352462:8354646 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 8354646, End: 8355485, Length: 840

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017208:516127:518559518559519350792Bacillus thuringiensis serovar chinensis CT-43 chromosome, completedaunorubicin resistance transmembrane protein6e-1788.2
NC_014171:521996:524428524428525219792Bacillus thuringiensis BMB171 chromosome, complete genomedaunorubicin resistance transmembrane protein6e-1788.2
NC_012914:970000:974625974625975419795Paenibacillus sp. JDR-2, complete genomeprotein of unknown function DUF9904e-1685.5
NC_011567:388358:395456395456396301846Anoxybacillus flavithermus WK1, complete genomeABC-type uncharacterized transport system, permease component2e-1479.7
NC_013929:5850599:586353958635395864354816Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein2e-1273.2
NC_016582:8031000:804022280402228041037816Streptomyces bingchenggensis BCW-1 chromosome, complete genomeABC transporter permease1e-1170.5
NC_010572:5445081:545646054564605457308849Streptomyces griseus subsp. griseus NBRC 13350, complete genomehypothetical protein2e-1169.7
NC_016114:4614924:462653946265394627339801Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein7e-1167.8
NC_015953:2640500:264867526486752649475801Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein8e-1064.7