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Query: NC_010572:8352462:8353839 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 8353839, End: 8354639, Length: 801

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016582:8031000:804103080410308041911882Streptomyces bingchenggensis BCW-1 chromosome, complete genomeputative integral membrane transport protein8e-1994.4
NC_013929:5850599:586435158643515865322972Streptomyces scabiei 87.22 chromosome, complete genomeABC transporter3e-1892.4
NC_019673:8581000:860407386040738604870798Saccharothrix espanaensis DSM 44229 complete genomehypothetical protein1e-1790.5
NC_010572:5445081:545730154573015458188888Streptomyces griseus subsp. griseus NBRC 13350, complete genomeputative integral membrane transport protein3e-1789
NC_015953:2640500:264778626477862648682897Streptomyces sp. SirexAA-E chromosome, complete genomehypothetical protein2e-1582.8
NC_016114:4614924:462734746273474628204858Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein6e-1581.6
NC_017208:516127:519355519355520140786Bacillus thuringiensis serovar chinensis CT-43 chromosome, completeABC transporter permease3e-1479
NC_014171:521996:525224525224526009786Bacillus thuringiensis BMB171 chromosome, complete genomeABC transporter permease4e-1478.6
NC_012914:970000:975426975426976217792Paenibacillus sp. JDR-2, complete genomeprotein of unknown function DUF9904e-1478.6
NC_003888:3138905:314905831490583149945888Streptomyces coelicolor A3(2), complete genomeintegral membrane transport protein1e-1273.6
NC_011567:388358:396306396306397091786Anoxybacillus flavithermus WK1, complete genomeABC-type uncharacterized transport system, permease component5e-1271.6