Some Help

Query: NC_010572:802269:827745 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 827745, End: 828593, Length: 849

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008390:1293823:131178013117801312586807Burkholderia cepacia AMMD chromosome 1, complete sequenceputative hemolysin-like protein5e-52204
NC_009256:1365500:137624213762421377048807Burkholderia vietnamiensis G4 chromosome 1, complete sequenceornithine-acyl[acyl carrier protein] N-acyltransferase2e-51202
NC_010084:2171881:219265321926532193459807Burkholderia multivorans ATCC 17616 chromosome 1, completeputative hemolysin-like protein7e-51201
NC_007434:1809946:182603718260371826942906Burkholderia pseudomallei 1710b chromosome I, complete sequencehypothetical protein1e-50199
NC_007651:3064530:3169373316937331703891017Burkholderia thailandensis E264 chromosome I, complete sequencehypothetical protein3e-50198
NC_012791:2423466:246341824634182464278861Variovorax paradoxus S110 chromosome 1, complete genomehypothetical protein9e-50197
NC_012968:507988:522603522603523373771Methylotenera mobilis JLW8, complete genomeornithine-acyl(acyl carrier protein) N-acyltransferase1e-49196
NC_007973:2348481:238184523818452382696852Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein4e-49195
NC_007005:4810295:483182648318264832581756Pseudomonas syringae pv. syringae B728a, complete genomehypothetical protein4e-38158
NC_014963:767034:789454789454790278825Terriglobus saanensis SP1PR4 chromosome, complete genomehypothetical protein2e-29129
NC_009429:686608:705006705006705791786Rhodobacter sphaeroides ATCC 17025 plasmid pRSPA01, completephospholipid/glycerol acyltransferase1e-24113
NC_013216:956461:964900964900965766867Desulfotomaculum acetoxidans DSM 771, complete genomePutative hemolysin-like protein2e-23109