Pre_GI: BLASTP Hits

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Query: NC_010572:802269:825210 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 825210, End: 825965, Length: 756

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_005125:4557889:456733945673394568136798Gloeobacter violaceus PCC 7421, complete genomehypothetical protein7e-2097.4
NC_012988:4633930:463767146376714638456786Methylobacterium extorquens DM4, complete genomeaminohydrolase/amidotransferase1e-1790.5
NC_012808:4235567:423930942393094240094786Methylobacterium extorquens AM1, complete genomeputative aminohydrolase/amidotransferase1e-1790.5
NC_010172:4185904:419096341909634191748786Methylobacterium extorquens PA1, complete genomeglutamine amidotransferase class-II1e-1790.5
NC_011757:4293000:429451342945134295298786Methylobacterium chloromethanicum CM4, complete genomeglutamine amidotransferase class-II2e-1789.7
NC_007952:1934249:193785119378511938684834Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein2e-1789.4
NC_006348:2372945:240540524054052406241837Burkholderia mallei ATCC 23344 chromosome 1, complete sequenceyafJ protein, putative1e-1686.7
NC_008836:1072721:110518111051811106017837Burkholderia mallei NCTC 10229 chromosome II, complete sequenceputative glutamine amidotransferase1e-1686.7
NC_007434:3588081:362054236205423621378837Burkholderia pseudomallei 1710b chromosome I, complete sequenceYafJ1e-1686.7
NC_009076:3179662:321212232121223212958837Burkholderia pseudomallei 1106a chromosome I, complete sequenceputative glutamine amidotransferase1e-1686.7
NC_009080:2123987:215644721564472157283837Burkholderia mallei NCTC 10247 chromosome II, complete sequenceputative glutamine amidotransferase1e-1686.7
NC_008785:516500:517517517517518353837Burkholderia mallei SAVP1 chromosome II, complete sequenceputative glutamine amidotransferase1e-1686.7
NC_009074:3163362:319582331958233196659837Burkholderia pseudomallei 668 chromosome I, complete sequenceputative glutamine amidotransferase1e-1686.7
NC_006350:3329477:336192933619293362774846Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein1e-1686.7
NC_008060:341851:345232345232346065834Burkholderia cenocepacia AU 1054 chromosome 1, complete sequenceglutamine amidotransferase, class-II2e-1686.3
NC_011000:3493575:350965335096533510486834Burkholderia cenocepacia J2315 chromosome 1, complete sequencefamily C44 cysteine peptidase2e-1686.3
NC_015381:766355:770359770359771228870Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein6e-1684.7
NC_007973:1889076:188907618890761889915840Ralstonia metallidurans CH34 chromosome 1, complete sequencehypothetical protein1e-1480.5
NC_008278:5855401:586440158644015865231831Frankia alni ACN14a, complete genomeGlutamine amidotransferases class-II4e-1065.1
NC_016002:2652500:266067026606702661431762Pseudogulbenkiania sp. NH8B, complete genomeglutamine amidotransferase, class-II6e-0858.2