Pre_GI: BLASTP Hits

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Query: NC_010572:802269:805093 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 805093, End: 806667, Length: 1575

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014623:1074299:1126008112600811275941587Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeadenosine deaminase3e-41170
NC_012881:3362955:3379490337949033809561467Desulfovibrio salexigens DSM 2638, complete genomeadenosine/AMP deaminase2e-34147
NC_006138:2341975:2370935237093523724101476Desulfotalea psychrophila LSv54, complete genomesimilar to adenosine deaminase1e-26121
NC_006347:4378684:4379896437989643814191524Bacteroides fragilis YCH46, complete genomeputative adenosine deaminase1e-1688.6