Pre_GI: BLASTP Hits

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Query: NC_010572:6463939:6483048 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 6483048, End: 6483848, Length: 801

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:1736854:175279917527991753617819Streptomyces fulvissimus DSM 40593, complete genomehypothetical protein1e-127456
NC_016582:9422650:943737394373739438140768Streptomyces bingchenggensis BCW-1 chromosome, complete genomehypothetical protein1e-89329
NC_015957:8103472:810785581078558108624770Streptomyces violaceusniger Tu 4113 chromosome, complete genome1e-75283
NC_013929:7606749:762671076267107627498789Streptomyces scabiei 87.22 chromosome, complete genomehypothetical protein1e-69262
NC_003155:7453994:747038574703857471197813Streptomyces avermitilis MA-4680, complete genomehypothetical protein9e-68256
NC_013510:3324978:333657133365713337347777Thermomonospora curvata DSM 43183, complete genomehypothetical protein5e-65247
NC_016114:5539021:555707055570705557858789Streptomyces flavogriseus ATCC 33331 chromosome, complete genomehypothetical protein6e-63240
NC_018524:4049990:406496040649604065766807Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehypothetical protein6e-57221
NC_014210:3763940:377937837793783780163786Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,hypothetical protein5e-51201
NC_018524:4049990:406580640658064066597792Nocardiopsis alba ATCC BAA-2165 chromosome, complete genomehypothetical protein9e-44177
NC_015953:1581542:159952115995211599841321Streptomyces sp. SirexAA-E chromosome, complete genome6e-39160