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Query: NC_010572:6293417:6305748 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 6305748, End: 6306557, Length: 810

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_015953:1756493:176211517621151762924810Streptomyces sp. SirexAA-E chromosome, complete genomecytochrome c class I4e-108390
NC_021177:1922930:193153519315351932344810Streptomyces fulvissimus DSM 40593, complete genomeCytochrome C heme-binding subunit1e-106386
NC_018750:2005229:201397220139722014781810Streptomyces venezuelae ATCC 10712, complete genomeubiquinol cytochrome C oxidoreductase, cytochrome C1 subunit1e-105382
NC_003888:2305901:231273923127392313548810Streptomyces coelicolor A3(2), complete genomecytochrome C heme-binding subunit1e-101369
NC_010617:1428902:143634614363461437137792Kocuria rhizophila DC2201, complete genomemenaquinol-cytochrome c reductase cytochrome c subunit5e-60231
NC_013169:1661135:166514816651481665939792Kytococcus sedentarius DSM 20547, complete genomecytochrome c, mono- and diheme variants family2e-59229
NC_015514:2414617:242279424227942423579786Cellulomonas fimi ATCC 484 chromosome, complete genomecytochrome c class I1e-58226
NC_015671:1540860:155473015547301555515786Cellvibrio gilvus ATCC 13127 chromosome, complete genomecytochrome c class I2e-57222
NC_012803:1302261:130728813072881308058771Micrococcus luteus NCTC 2665, complete genomecytochrome c, mono- and diheme variants family1e-56219
NC_009664:3718927:373539137353913736224834Kineococcus radiotolerans SRS30216, complete genomecytochrome c class I2e-56219
NC_014151:2312000:231862023186202319405786Cellulomonas flavigena DSM 20109 chromosome, complete genomecytochrome c class I3e-54212
NC_015588:1965787:197223319722331973012780Isoptericola variabilis 225 chromosome, complete genomecytochrome c class I8e-54210
NC_014643:2056280:215020121502012150896696Rothia dentocariosa ATCC 17931 chromosome, complete genomemenaquinol-cytochrome c reductase cytochrome c subunit8e-54210
NC_019673:1656680:167812516781251678934810Saccharothrix espanaensis DSM 44229 complete genomeMenaquinol-cytochrome c reductase cytochrome c subunit4e-49194
NC_004369:2203947:221320222132022214092891Corynebacterium efficiens YS-314, complete genomeputative cytochrome c oxidase subunit I1e-48192
NC_016802:1615748:162474916247491625642894Corynebacterium diphtheriae HC02 chromosome, complete genomeubiquinol-cytochrome C reductase cytochrome C subunit5e-46184
NC_014210:3742112:375190537519053752840936Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,cytochrome c class I6e-32137
NC_012660:2045398:2065341206534120666301290Pseudomonas fluorescens SBW25 chromosome, complete genomeputative cytochrome C oxidase (monoheme and diheme subunits)2e-0756.6
NC_009379:435404:448269448269449207939Polynucleobacter sp. QLW-P1DMWA-1, complete genomecytochrome c oxidase, cbb3-type, subunit III3e-0755.5
NC_019940:1309359:131050713105071311253747Thioflavicoccus mobilis 8321 chromosome, complete genomecytochrome c5534e-0755.5
NC_019940:3089884:309482930948293095581753Thioflavicoccus mobilis 8321 chromosome, complete genomecytochrome c5538e-0754.7
NC_014541:2122788:213793621379362138925990Ferrimonas balearica DSM 9799 chromosome, complete genomecytochrome c oxidase, cbb3-type, subunit III1e-0653.9
NC_016745:546249:562506562506563123618Oceanimonas sp. GK1 chromosome, complete genomecytochrome c43e-0652.4
NC_021150:1965264:198571919857191986639921Azotobacter vinelandii CA6, complete genomecytochrome c oxidase, cbb3-type, subunit III4e-0652
NC_012560:1965251:198570619857061986626921Azotobacter vinelandii DJ, complete genomecytochrome c oxidase, cbb3-type, subunit III4e-0652
NC_007298:1666480:168209816820981682823726Dechloromonas aromatica RCB, complete genomeCytochrome c, class I5e-0651.6
NC_007492:2035761:203768520376852038638954Pseudomonas fluorescens PfO-1, complete genomeCytochrome c oxidase cbb3-type, subunit III8e-0651.2