Pre_GI: BLASTP Hits

Some Help

Query: NC_010572:6293417:6304471 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 6304471, End: 6304872, Length: 402

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_021177:1922930:193320819332081933609402Streptomyces fulvissimus DSM 40593, complete genomeTwo-component system response regulator1e-50197
NC_015953:1756493:176378717637871764188402Streptomyces sp. SirexAA-E chromosome, complete genomeresponse regulator receiver protein2e-48191
NC_018750:2005229:201567920156792016080402Streptomyces venezuelae ATCC 10712, complete genomeputative two-component system response regulator1e-47188
NC_003888:2305901:231445323144532314854402Streptomyces coelicolor A3(2), complete genomeresponse regulator3e-43173
NC_014210:3742112:375396337539633754403441Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,response regulator receiver protein4e-35146
NC_015671:1540860:155642215564221556859438Cellvibrio gilvus ATCC 13127 chromosome, complete genomeresponse regulator receiver protein1e-25115
NC_014151:2312000:231728623172862317702417Cellulomonas flavigena DSM 20109 chromosome, complete genomeresponse regulator receiver protein1e-24112
NC_015514:2414617:242144124214412421875435Cellulomonas fimi ATCC 484 chromosome, complete genomeresponse regulator receiver4e-24109
NC_015588:1965787:197086019708601971267408Isoptericola variabilis 225 chromosome, complete genomeresponse regulator receiver6e-23105
NC_019673:1656680:167652116765211676931411Saccharothrix espanaensis DSM 44229 complete genomeResponse regulator receiver protein3e-2096.7