Pre_GI: BLASTP Hits

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Query: NC_010572:5445081:5466298 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 5466298, End: 5467122, Length: 825

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016114:4614924:463799946379994638871873Streptomyces flavogriseus ATCC 33331 chromosome, complete genomeexcalibur domain-containing protein2e-31136
NC_009664:1434974:144249414424941442841348Kineococcus radiotolerans SRS30216, complete genomeExcalibur domain protein2e-0756.2
NC_009342:464210:468140468140468706567Corynebacterium glutamicum R chromosome, complete genomehypothetical protein9e-0754.3
NC_007333:810381:846032846032846460429Thermobifida fusca YX, complete genomehypothetical protein1e-0653.9
NC_012491:3704000:371231537123153713247933Brevibacillus brevis NBRC 100599, complete genomeputative nuclease precursor1e-0653.9
NC_006958:359760:359760359760360335576Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein1e-0653.5
NC_003450:359759:359759359759360316558Corynebacterium glutamicum ATCC 13032, complete genomehypothetical protein1e-0653.5
NC_012590:1950154:196931519693151969755441Corynebacterium aurimucosum ATCC 700975, complete genomeputative secreted protein2e-0653.5