Pre_GI: BLASTP Hits

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Query: NC_010572:4181403:4186335 Streptomyces griseus subsp. griseus NBRC 13350, complete genome

Start: 4186335, End: 4186820, Length: 486

Host Lineage: Streptomyces griseus; Streptomyces; Streptomycetaceae; Actinomycetales; Actinobacteria; Bacteria

General Information: Soil bacterium producing an antituberculosis agent. The characteristic earthy smell of freshly plowed soil is actually attributed to the aromatic terpenoid geosmin produced by species of Streptomyces. There are currently 364 known species of this genus, many of which are the most important industrial producers of antibiotics and other secondary metabolites of antibacterial, antifungal, antiviral, and antitumor nature, as well as immunosuppressants, antihypercholesterolemics, etc. Streptomycetes are crucial in the soil environment because their diverse metabolism allows them to degrade the insoluble remains of other organisms, including recalcitrant compounds such as lignocelluloses and chitin. Streptomycetes produce both substrate and aerial mycelium. The latter shows characteristic modes of branching, and in the course of the streptomycete complex life cycle, these hyphae are partly transformed into chains of spores, which are often called conidia or arthrospores. An important feature in Streptomyces is the presence of type-I peptidoglycan in the cell walls that contains characteristic interpeptide glycine bridges. Another remarkable trait of streptomycetes is that they contain very large (~8 million base pairs which is about twice the size of most bacterial genomes) linear chromosomes with distinct telomeres. These rearrangements consist of the deletion of several hundred kilobases, often associated with the amplification of an adjacent sequence, and lead to metabolic diversity within the Streptomyces group. Sequencing of several strains of Streptomyces is aimed partly on understanding the mechanisms involved in these diversification processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016109:4581467:458291145829114583399489Kitasatospora setae KM-6054, complete genomehypothetical protein2e-51201
NC_016111:1904859:191538119153811915872492Streptomyces cattleya NRRL 8057, complete genomehypothetical protein5e-48189
NC_013510:1023348:102287510228751023351477Thermomonospora curvata DSM 43183, complete genomehypothetical protein5e-36149
NC_016887:221788:229081229081229551471Nocardia cyriacigeorgica GUH-2, complete genomehypothetical protein5e-35146
NC_017186:8056451:805777680577768058252477Amycolatopsis mediterranei S699 chromosome, complete genomehypothetical protein2e-31134
NC_014318:8054689:805773080577308058206477Amycolatopsis mediterranei U32 chromosome, complete genomehypothetical protein2e-31134
NC_007333:2093167:211444921144492114874426Thermobifida fusca YX, complete genomehypothetical protein9e-23105
NC_013169:1410384:142616614261661426636471Kytococcus sedentarius DSM 20547, complete genomehypothetical protein2e-2097.8