Pre_GI: BLASTP Hits

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Query: NC_010557:679656:737212 Burkholderia ambifaria MC40-6 chromosome 3, complete sequence

Start: 737212, End: 737880, Length: 669

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_014502:113839:133104133104133757654Cyanothece sp. PCC 7822 plasmid Cy782203, complete sequenceanti-ECF sigma factor ChrR5e-41167
NC_016147:1672482:167872216787221679390669Pseudoxanthomonas spadix BD-a59 chromosome, complete genomeanti-ECFsigma factor ChrR1e-41169
NC_015581:1731120:173645617364561737106651Thioalkalimicrobium cyclicum ALM1 chromosome, complete genomeanti-ECFsigma factor ChrR1e-33142
NC_011662:2320100:235633423563342357002669Thauera sp. MZ1T, complete genomeanti-ECFsigma factor, ChrR1e-77289
NC_008740:443274:482796482796483464669Marinobacter aquaeolei VT8, complete genomeanti-ECFsigma factor, ChrR8e-42170
NC_015675:2247960:224862122486212248971351Mesorhizobium opportunistum WSM2075 chromosome, complete genomeanti-ECFsigma factor, ChrR1e-0860.1
NC_008392:1029134:107617310761731076907735Burkholderia cepacia AMMD chromosome 3, complete sequenceanti-ECFsigma factor, ChrR3e-122437
NC_010338:4148667:415903141590314159705675Caulobacter sp. K31, complete genomeanti-ECFsigma factor, ChrR2e-43175
NC_008750:2332000:234430223443022344970669Shewanella sp. W3-18-1, complete genomeanti-ECFsigma factor, ChrR2e-39162
NC_007404:2048000:205983720598372060289453Thiobacillus denitrificans ATCC 25259, complete genomeAnti-Sigm factor, ChrR7e-1167.4
NC_015727:764744:772291772291772707417Cupriavidus necator N-1 plasmid BB1p, complete sequencehypothetical protein6e-0754.3
NC_009925:2240871:225630122563012256981681Acaryochloris marina MBIC11017, complete genomehypothetical protein3e-39161
NC_008260:2142311:215501121550112155673663Alcanivorax borkumensis SK2, complete genomehypothetical protein1e-43176
NC_004605:1385444:138687013868701387448579Vibrio parahaemolyticus RIMD 2210633 chromosome II, completehypothetical protein5e-28124
NC_009659:1024201:103920510392051039900696Janthinobacterium sp. Marseille chromosome, complete genometranscription negative regulator ChrR2e-60231