Pre_GI: BLASTP Hits

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Query: NC_010557:316000:318272 Burkholderia ambifaria MC40-6 chromosome 3, complete sequence

Start: 318272, End: 319288, Length: 1017

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010623:1961685:1995143199514319961891047Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family8e-159560
NC_010623:1961685:2021028202102820220441017Burkholderia phymatum STM815 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-70266
NC_014323:992978:1005383100538310064171035Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein5e-70265
NC_012660:3179980:3185843318584331868591017Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein8e-64244
NC_016830:3869572:3944718394471839457341017Pseudomonas fluorescens F113 chromosome, complete genomearaC family transcriptional regulator2e-56219
NC_008463:4342119:4364836436483643658371002Pseudomonas aeruginosa UCBPP-PA14, complete genomeprobable transcriptional regulator2e-52206
NC_011770:4542183:4564793456479345657941002Pseudomonas aeruginosa LESB58, complete genomeputative transcriptional regulator4e-52205
NC_010501:3671517:3693177369317736942051029Pseudomonas putida W619, complete genometranscriptional regulator, AraC family8e-37154
NC_008702:3375027:3391123339112333922561134Azoarcus sp. BH72, complete genomeputative ornithine utilization regulator3e-34145
NC_013446:2623528:2624404262440426254981095Comamonas testosteroni CNB-2, complete genometranscriptional regulator, AraC family3e-33142
NC_007974:2097334:2111901211190121129471047Ralstonia metallidurans CH34 chromosome 2, complete sequencetranscriptional regulator, AraC family2e-31136
NC_003911:4001094:4017291401729140183221032Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, AraC family4e-31135
NC_009952:2752500:2765180276518027662081029Dinoroseobacter shibae DFL 12, complete genomeputative transcriptional regulator4e-28125
NC_008740:2905990:2905990290599029070031014Marinobacter aquaeolei VT8, complete genomehelix-turn-helix- domain containing protein, AraC type7e-27121
NC_002516:891000:9057269057269067451020Pseudomonas aeruginosa PAO1, complete genometranscriptional regulator OruR4e-21102
NC_008463:4743296:4744858474485847458771020Pseudomonas aeruginosa UCBPP-PA14, complete genometranscriptional regulator OruR4e-21102
NC_011770:4924127:4961086496108649621051020Pseudomonas aeruginosa LESB58, complete genometranscriptional regulator OruR4e-21102
NC_012560:2348202:2371675237167523727211047Azotobacter vinelandii DJ, complete genomeTranscription activator in PHB biosynthesis, AraC family2e-1893.6
NC_021150:2348214:2371687237168723727331047Azotobacter vinelandii CA6, complete genomeTranscription activator in PHB biosynthesis, AraC family2e-1893.6
NC_002516:2306776:2306776230677623078101035Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator3e-1893.2
NC_004129:4596040:4617563461756346185851023Pseudomonas fluorescens Pf-5, complete genometranscriptional regulator, AraC family2e-1790.1
NC_012660:5793200:5815075581507558162291155Pseudomonas fluorescens SBW25 chromosome, complete genomeputative AraC family regulatory protein8e-1788.2
NC_004578:5916711:594281359428135943805993Pseudomonas syringae pv. tomato str. DC3000, complete genometranscriptional regulator, AraC family1e-1687.8
NC_018691:4619245:4644618464461846456521035Alcanivorax dieselolei B5 chromosome, complete genomeTranscriptional regulator, AraC family protein3e-1686.3
NC_020209:47504:7962979629806361008Pseudomonas poae RE*1-1-14, complete genomeAraC family transcriptional regulator5e-1685.5
NC_003911:1078949:110804211080421109040999Silicibacter pomeroyi DSS-3, complete genometranscriptional regulator, AraC family5e-1685.5
NC_009656:5505413:5527239552723955283091071Pseudomonas aeruginosa PA7 chromosome, complete genomeAraC family transcriptional regulator6e-1685.1
NC_014323:1:1504715047161081062Herbaspirillum seropedicae SmR1 chromosome, complete genomeAraC family transcription regulator protein7e-1685.1
NC_013222:1659619:168204516820451683022978Robiginitalea biformata HTCC2501, complete genometranscriptional regulator, AraC family protein1e-1584.3
NC_010511:6067000:6076192607619260772861095Methylobacterium sp. 4-46 chromosome, complete genomeAraC family transcriptional regulator2e-1584
NC_014310:1822751:1837637183763718386561020Ralstonia solanacearum PSI07 megaplasmid, complete sequenceAraC family transcriptional regulator2e-1583.6
NC_013222:1659619:168700316870031687992990Robiginitalea biformata HTCC2501, complete genometranscriptional regulator, AraC family protein2e-1583.2
NC_011001:163813:1853691853691864151047Burkholderia cenocepacia J2315 chromosome 2, complete sequenceAraC family regulatory protein3e-1582.8
NC_003296:673790:7245307245307255491020Ralstonia solanacearum GMI1000 plasmid pGMI1000MP, completePROBABLE TRANSCRIPTION REGULATOR PROTEIN3e-1582.8
NC_013037:6344532:6368914636891463699511038Dyadobacter fermentans DSM 18053, complete genometranscriptional regulator, AraC family3e-1582.8
NC_007511:3371319:3372433337243333734791047Burkholderia sp. 383 chromosome 2, complete sequencetranscriptional regulator, AraC family5e-1582
NC_015136:1101725:1127466112746611284941029Burkholderia sp. CCGE1001 chromosome 1, complete sequenceAraC family transcriptional regulator6e-1581.6
NC_012880:1585255:1593922159392215949351014Dickeya dadantii Ech703, complete genometranscriptional regulator, AraC family7e-1581.6
NC_016609:3835656:384093838409383841936999Niastella koreensis GR20-10 chromosome, complete genomeAraC family transcriptional regulator2e-1480.1
NC_011757:1288637:1298341129834112994411101Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family2e-1480.1
NC_011894:2359128:2371528237152823726161089Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family4e-1479.3
NC_010506:3585533:3602734360273436038131080Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, AraC family8e-1478.2
NC_014259:2948335:2949247294924729503171071Acinetobacter sp. DR1 chromosome, complete genomeAraC family transcriptional regulator8e-1478.2
NC_010172:31264:3612336123372231101Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type1e-1377.8
NC_010501:4989455:4998963499896350000001038Pseudomonas putida W619, complete genometranscriptional regulator, AraC family1e-1377.8
NC_013510:4484000:4500552450055245016071056Thermomonospora curvata DSM 43183, complete genometranscriptional regulator, AraC family2e-1377
NC_020829:4429435:4441701444170144427711071Pseudomonas denitrificans ATCC 13867, complete genomeAraC family transcriptional regulator2e-1376.6
NC_015376:3320818:3331605333160533326571053Burkholderia gladioli BSR3 chromosome chromosome 2, completeTranscriptional regulator, AraC family protein2e-1376.6
NC_010172:31264:5004950049511311083Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type4e-1375.9
NC_008390:2448379:2449503244950324505401038Burkholderia cepacia AMMD chromosome 1, complete sequencetranscriptional regulator, AraC family4e-1375.9
NC_020829:1840281:1842091184209118431221032Pseudomonas denitrificans ATCC 13867, complete genomeputative regulator6e-1375.1
NC_015663:3742738:3760268376026837612751008Enterobacter aerogenes KCTC 2190 chromosome, complete genomeAraC family transcriptional regulator1e-1274.7
NC_020064:521500:5491445491445502021059Serratia marcescens FGI94, complete genomeDNA-binding domain-containing protein, AraC-type1e-1274.3
NC_020181:1653261:1656963165696316579701008Enterobacter aerogenes EA1509E, complete genomevirulence regulating protein1e-1274.3
NC_008061:2193000:2207475220747522085691095Burkholderia cenocepacia AU 1054 chromosome 2, complete sequencetranscriptional regulator, AraC family1e-1274.3
NC_009439:101174:121557121557122549993Pseudomonas mendocina ymp, complete genomeAraC family transcriptional regulator2e-1273.2
NC_015690:1967244:2015425201542520164621038Paenibacillus mucilaginosus KNP414 chromosome, complete genomeAraC family transcriptional regulator3e-1273.2
NC_011894:2125474:213090421309042131221318Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family3e-1272.8
NC_011757:4293000:4333052433305243341491098Methylobacterium chloromethanicum CM4, complete genometranscriptional regulator, AraC family5e-1272.4
NC_007492:3180480:318583231858323186830999Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family8e-1271.6
NC_008027:2648560:2664870266487026658741005Pseudomonas entomophila L48, complete genomeDNA-binding protein, AraC family1e-1171.2
NC_007492:3180480:3186837318683731878891053Pseudomonas fluorescens PfO-1, complete genomeTranscriptional Regulator, AraC family1e-1171.2
NC_002516:2436304:244856824485682449545978Pseudomonas aeruginosa PAO1, complete genomeprobable transcriptional regulator1e-1171.2
NC_006351:73000:8293882938839571020Burkholderia pseudomallei K96243 chromosome 2, complete sequenceregulatory protein2e-1170.1
NC_009075:92210:1022481022481032521005Burkholderia pseudomallei 668 chromosome II, complete sequenceputative transcriptional regulator2e-1170.1
NC_013592:1602242:1616182161618216171921011Dickeya dadantii Ech586, complete genometranscriptional regulator, AraC family3e-1169.7
NC_007651:3656433:3668226366822636692451020Burkholderia thailandensis E264 chromosome I, complete sequencetranscriptional regulator, putative7e-1168.6
NC_020829:4429435:4442768444276844438141047Pseudomonas denitrificans ATCC 13867, complete genomeAraC family transcriptional regulator6e-1168.6
NC_009075:92210:946159461595127513Burkholderia pseudomallei 668 chromosome II, complete sequencetranscriptional regulator, AraC family6e-1168.6
NC_010162:8873051:888440788844078885000594Sorangium cellulosum 'So ce 56', complete genomeAraC family transcriptional regulator6e-1168.6
NC_011894:7702000:773128277312827731632351Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family6e-1168.6
NC_007435:1914375:191647419164741917091618Burkholderia pseudomallei 1710b chromosome II, complete sequenceAraC family regulatory protein9e-1167.8
NC_006351:73000:752967529675802507Burkholderia pseudomallei K96243 chromosome 2, complete sequenceAraC family regulatory protein1e-1067.8
NC_014762:2428721:2451614245161424526541041Sulfuricurvum kujiense DSM 16994 chromosome, complete genometranscriptional regulator, arac family1e-1067.8
NC_011884:2422000:2433017243301724340331017Cyanothece sp. PCC 7425, complete genometranscriptional regulator, AraC family1e-1067.4
NC_011894:2503639:251167325116732511990318Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family2e-1066.6
NC_008705:3430839:3436435343643534374391005Mycobacterium sp. KMS, complete genomehelix-turn-helix- domain containing protein, AraC type3e-1066.2
NC_009077:3376351:3381947338194733829511005Mycobacterium sp. JLS, complete genomehelix-turn-helix- domain containing protein, AraC type3e-1066.2
NC_008146:3401743:3408153340815334091571005Mycobacterium sp. MCS, complete genometranscriptional regulator, AraC family3e-1066.2
NC_011894:585637:613011613011613421411Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family3e-1066.2
NC_016947:2380500:2392470239247023934741005Mycobacterium intracellulare MOTT-02 chromosome, complete genomeAraC family transcriptional regulator3e-1066.2
NC_013192:1504310:1504310150431015053831074Leptotrichia buccalis DSM 1135, complete genometranscriptional regulator, AraC family4e-1065.9
NC_010172:573046:5788135788135798771065Methylobacterium extorquens PA1, complete genomehelix-turn-helix- domain containing protein AraC type5e-1065.5
NC_009078:74954:773597735977871513Burkholderia pseudomallei 1106a chromosome II, complete sequenceAraC family regulatory protein6e-1065.5
NC_009078:74954:823408234082975636Burkholderia pseudomallei 1106a chromosome II, complete sequenceregulatory protein7e-1065.1
NC_009832:1280938:1293321129332112943581038Serratia proteamaculans 568, complete genometranscriptional regulator, AraC family1e-0964.7
NC_010511:4415731:442598544259854426191207Methylobacterium sp. 4-46 chromosome, complete genome1e-0964.3
NC_015563:5289875:5289875528987552908821008Delftia sp. Cs1-4 chromosome, complete genomeAraC family transcriptional regulator2e-0963.9
NC_009338:4869700:4887442488744248884821041Mycobacterium gilvum PYR-GCK chromosome, complete genomehelix-turn-helix domain-containing protein2e-0963.9
NC_018691:761560:7629207629207639421023Alcanivorax dieselolei B5 chromosome, complete genomePutative AraC family transcription regulator2e-0963.5
NC_007650:84140:9053790537915531017Burkholderia thailandensis E264 chromosome II, complete sequencehypothetical protein3e-0963.2
NC_014364:3633291:364876036487603649443684Spirochaeta smaragdinae DSM 11293 chromosome, complete genome3e-0963.2
NC_010506:5155951:5172420517242051735231104Shewanella woodyi ATCC 51908, complete genometranscriptional regulator, AraC family7e-0961.6
NC_018691:2254566:2259228225922822602921065Alcanivorax dieselolei B5 chromosome, complete genomePutative transcriptional regulator7e-0961.6
NC_010511:2079744:210000321000032100419417Methylobacterium sp. 4-46 chromosome, complete genome1e-0860.8
NC_011979:589874:594253594253595227975Geobacter sp. FRC-32, complete genometranscriptional regulator, AraC family2e-0860.5
NC_017075:3165858:3193580319358031946051026Rubrivivax gelatinosus IL144, complete genomeAraC family transcriptional regulator2e-0860.5
NC_010511:7553703:757677675767767577060285Methylobacterium sp. 4-46 chromosome, complete genome3e-0859.7
NC_016887:1714664:172429617242961725198903Nocardia cyriacigeorgica GUH-2, complete genometranscriptional regulator4e-0859.3
NC_017075:2689014:2690594269059426916161023Rubrivivax gelatinosus IL144, complete genomeAraC family transcriptional regulator4e-0859.3
NC_003197:1170746:117274611727461173525780Salmonella typhimurium LT2, complete genomebacterial regulatory protein7e-0858.5
NC_016810:1126693:112906811290681129847780Salmonella enterica subsp. enterica serovar Typhimurium strputative transcriptional regulator7e-0858.5
NC_016856:1128715:113109011310901131869780Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sregulatory protein7e-0858.5
NC_016860:1168431:117043111704311171210780Salmonella enterica subsp. enterica serovar Typhimurium strAraC family transcriptional regulator7e-0858.5
NC_016863:1128381:113038111303811131160780Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1regulatory protein7e-0858.5
NC_011894:2747491:2753607275360727547491143Methylobacterium nodulans ORS 2060, complete genometranscriptional regulator, AraC family7e-0858.5
NC_016514:1627664:162959516295951630386792Enterobacter cloacae EcWSU1 chromosome, complete genomeprotein YbcM7e-0858.5
NC_016831:1950650:196440919644091965197789Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative transcriptional regulator9e-0858.2
NC_011149:1035990:104229310422931043081789Salmonella enterica subsp. enterica serovar Agona str. SL483,bacterial regulatory protein8e-0858.2
NC_011083:1173802:117746211774621178250789Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,bacterial regulatory protein8e-0858.2
NC_011094:1127983:113164311316431132431789Salmonella enterica subsp. enterica serovar Schwarzengrund strregulatory protein8e-0858.2
NC_012125:2687980:270174127017412702529789Salmonella enterica subsp. enterica serovar Paratyphi C strainAraC family transcriptional regulator8e-0858.2
NC_006511:1808815:182479918247991825578780Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCbacterial regulatory protein, AraC family8e-0858.2
NC_011147:1802535:181998218199821820761780Salmonella enterica subsp. enterica serovar Paratyphi A straraC family transcriptional regulator8e-0858.2
NC_011294:1048223:105059810505981051377780Salmonella enterica subsp. enterica serovar Enteritidis strtranscriptional regulator8e-0858.2
NC_011274:1057887:105988710598871060666780Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91transcriptional regulator1e-0757.8
NC_015690:4469775:4555014455501445566061593Paenibacillus mucilaginosus KNP414 chromosome, complete genomeYtdP22e-0757.4
NC_003198:1078113:1081781108178110832711491Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative transcriptional regulator (pseudogene)2e-0757.4
NC_016857:1126693:112900511290051129847843Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74regulatory protein1e-0757.4
NC_017046:1127325:112926211292621130104843Salmonella enterica subsp. enterica serovar Typhimurium str. 798transcriptional regulator1e-0757.4
NC_016832:1880174:189439218943921894934543Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Bacterial regulatory protein, AraC2e-0757
NC_011205:1147556:115121611512161152004789Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853AraC family transcriptional regulator2e-0757
NC_010102:2020762:203451220345122035300789Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0757
NC_007645:6407370:642240164224016423237837Hahella chejuensis KCTC 2396, complete genomeAraC-type DNA-binding domain-containing protein2e-0756.6
NC_015677:3787419:379209937920993793067969Ramlibacter tataouinensis TTB310 chromosome, complete genomeAraC family transcriptional regulator3e-0756.2
NC_015723:1047418:1058612105861210596371026Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator8e-0755.1
NC_015723:1448000:1459268145926814602901023Cupriavidus necator N-1 chromosome 2, complete sequenceAraC family transcriptional regulator1e-0654.3
NC_008314:1825223:1825223182522318262451023Ralstonia eutropha H16 chromosome 2, complete sequencetranscriptional regulator, AraC-family2e-0653.9
NC_013406:1640787:1643715164371516449321218Paenibacillus sp. Y412MC10 chromosome, complete genometwo component AraC family transcriptional regulator2e-0653.9
NC_002678:5060670:5060670506067050617341065Mesorhizobium loti MAFF303099, complete genomehypothetical protein2e-0653.5
NC_007802:1240989:125477712547771255535759Jannaschia sp. CCS1, complete genometranscriptional regulator, AraC family3e-0653.1
NC_014206:1694330:1703164170316417043721209Geobacillus sp. C56-T3 chromosome, complete genomeAraC family transcriptional regulator3e-0652.8
NC_014483:1146682:1146682114668211479831302Paenibacillus polymyxa E681 chromosome, complete genomeResponse regulator containing CheY-like receiver domain and AraC-type DNA-binding domain8e-0651.6