Pre_GI: BLASTP Hits

Some Help

Query: NC_010552:58294:70565 Burkholderia ambifaria MC40-6 chromosome 2, complete sequence

Start: 70565, End: 71965, Length: 1401

Host Lineage: Burkholderia ambifaria; Burkholderia; Burkholderiaceae; Burkholderiales; Proteobacteria; Bacteria

General Information: This strain was isolated from a cystic fibrosis patient. These bacteria present great versatility to adapt to diverse environments, and are capable of degrading pollutants in water and soil, and fixing atmospheric nitrogen. This species include strains isolated from cystic fibrosis patients as well as strains with potential use in biocontrol.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_012968:2000218:2009033200903320104991467Methylotenera mobilis JLW8, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-58225
NC_014034:1330843:1341665134166513430081344Rhodobacter capsulatus SB1003 chromosome, complete genomereverse transcriptase family protein3e-55216
NC_012673:785718:7948927948927962801389Exiguobacterium sp. AT1b, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)1e-52207
NC_005773:5636606:5648997564899756504331437Pseudomonas syringae pv. phaseolicola 1448A, complete genomeprophage PSPPH06, putative reverse transcriptase/maturase3e-44179
NC_010322:1817598:1847667184766718491031437Pseudomonas putida GB-1 chromosome, complete genomeRNA-directed DNA polymerase1e-42174
NC_013730:778076:7882497882497896341386Spirosoma linguale DSM 74, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)9e-42171
NC_016629:415711:4209054209054222811377Desulfovibrio africanus str. Walvis Bay chromosome, completeRNA-directed DNA polymerase4e-40166
NC_008209:1097607:110770411077041108630927Roseobacter denitrificans OCh 114, complete genomehypothetical protein2e-23110
NC_011001:1145508:1153138115313811546701533Burkholderia cenocepacia J2315 chromosome 2, complete sequenceputative reverse transcriptase-Group II intron2e-1377.8
NC_010337:1051425:1056587105658710580141428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)2e-1377.4
NC_014829:1526401:1533531153353115348561326Bacillus cellulosilyticus DSM 2522 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-1377
NC_010337:1:2217622176236031428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)9e-1375.5
NC_010337:1051425:1054702105470210561291428Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase (RNA-dependent DNA polymerase)9e-1375.5
NC_003078:671000:6755736755736768321260Sinorhizobium meliloti 1021 plasmid pSymB, complete sequenceputative reverse transcriptasematurase protein4e-1273.2
NC_017098:1149145:1161306116130611625891284Spirochaeta africana DSM 8902 chromosome, complete genomeRetron-type reverse transcriptase1e-1171.2
NC_014973:493500:5072475072475085841338Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-1171.2
NC_019697:1879769:1893778189377818951931416Chamaesiphon minutus PCC 6605, complete genomeRetron-type reverse transcriptase2e-1170.9
NC_015656:1947810:1961959196195919632241266Frankia symbiont of Datisca glomerata chromosome, complete genomeRNA-directed DNA polymerase3e-1170.5
NC_003552:3479000:3490274349027434915211248Methanosarcina acetivorans C2A, complete genomereverse transcriptase3e-1170.1
NC_014934:3751612:3771375377137537726281254Cellulophaga algicola DSM 14237 chromosome, complete genomeRNA-directed DNA polymerase (reverse transcriptase)3e-1170.1
NC_014934:244587:2514522514522527051254Cellulophaga algicola DSM 14237 chromosome, complete genomeRNA-directed DNA polymerase (reverse transcriptase)3e-1170.1
NC_014623:4683671:4704603470460347064411839Stigmatella aurantiaca DW4/3-1 chromosome, complete genomeRNA-directed DNA polymerase5e-1169.7
NC_014655:17641:2888228882303301449Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA-directed DNA polymerase (reverse transcriptase)5e-1169.3
NC_014655:2092365:2096909209690920981411233Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA-directed DNA polymerase8e-1168.9
NC_014655:2092365:2098774209877421000061233Leadbetterella byssophila DSM 17132 chromosome, complete genomeRNA-directed DNA polymerase (reverse transcriptase)8e-1168.9
NC_008312:1600000:161571516157151616581867Trichodesmium erythraeum IMS101, complete genomehypothetical protein9e-1168.6
NC_009142:2480608:250647125064712507448978Saccharopolyspora erythraea NRRL 2338, complete genomeRNA-directed DNA polymerase2e-1067.8
NC_018867:993903:9977499977499990951347Dehalobacter sp. CF chromosome, complete genomeRetron-type reverse transcriptase2e-1067.4
NC_019978:1477724:1479685147968514809741290Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase2e-1067.4
NC_014041:1395761:1412056141205614131291074Zunongwangia profunda SM-A87 chromosome, complete genomereverse transcriptase2e-1067.4
NC_019978:1477724:1477724147772414790131290Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase3e-1067
NC_009921:1645380:1652195165219516536581464Frankia sp. EAN1pec, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-1067
NC_009921:3384116:3394030339403033954931464Frankia sp. EAN1pec, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-1067
NC_009921:3551036:3620896362089636223591464Frankia sp. EAN1pec, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-1067
NC_011830:3025437:3041551304155130429601410Desulfitobacterium hafniense DCB-2, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1066.2
NC_007907:1940000:1956132195613219574271296Desulfitobacterium hafniense Y51, complete genomehypothetical protein5e-1066.2
NC_013851:949973:9619009619009632551356Allochromatium vinosum DSM 180 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-1066.2
NC_016845:1773416:1779858177985817813451488Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative reverse transcriptase/maturase5e-1066.2
NC_016845:2306744:2323071232307123245581488Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative reverse transcriptase/maturase5e-1066.2
NC_016845:4046142:4057358405735840588451488Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,putative reverse transcriptase/maturase5e-1066.2
NC_004463:2059500:2069705206970520711801476Bradyrhizobium japonicum USDA 110, complete genomeprobable reverse transcriptase/maturase family protein6e-1065.9
NC_008576:2458573:2464162246416224654631302Magnetococcus sp. MC-1, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-1065.9
NC_002939:2697767:2709108270910827104121305Geobacter sulfurreducens PCA, complete genomegroup II intron, maturase7e-1065.9
NC_002939:1021297:1029182102918210304861305Geobacter sulfurreducens PCA, complete genomegroup II intron, maturase7e-1065.9
NC_018866:1706000:1716623171662317179691347Dehalobacter sp. DCA chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)8e-1065.5
NC_018866:925704:9331289331289344741347Dehalobacter sp. DCA chromosome, complete genomeRetron-type reverse transcriptase8e-1065.5
NC_010660:33109:3388333883351001218Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequencereverse transcriptase1e-0965.1
NC_011751:256830:2698272698272710771251Escherichia coli UMN026 chromosome, complete genomeputative reverse transcriptase1e-0965.1
NC_019902:2372097:2380328238032823815751248Thioalkalivibrio nitratireducens DSM 14787, complete genomeRetron-type reverse transcriptase2e-0964.7
NC_014366:3653190:3655631365563136569201290Gamma proteobacterium HdN1, complete genomeRNA-directed DNA polymerase (reverse transcriptase)2e-0964.3
NC_014366:3653190:3667976366797636692651290Gamma proteobacterium HdN1, complete genomeRNA-directed DNA polymerase (reverse transcriptase)2e-0964.3
NC_011983:1746000:1749627174962717508861260Agrobacterium radiobacter K84 chromosome 2, complete genomereverse transcriptase/maturase protein3e-0963.9
NC_010793:126111:1376251376251387641140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase2e-0963.9
NC_011745:333061:3383153383153395471233Escherichia coli ED1a chromosome, complete genomeputative reverse transcriptase2e-0963.9
NC_013194:4964000:4991894499189449931561263Candidatus Accumulibacter phosphatis clade IIA str. UW-1, completeRNA-directed DNA polymerase (Reverse transcriptase)2e-0963.9
NC_010793:1287877:1298339129833912994781140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase2e-0963.9
NC_007498:2638671:2649707264970726510471341Pelobacter carbinolicus DSM 2380, complete genomeprophage LambdaSa1, reverse transcriptase/maturase family protein3e-0963.5
NC_020304:3029243:3041756304175630431051350Desulfocapsa sulfexigens DSM 10523, complete genomeRetron-type reverse transcriptase4e-0963.2
NC_010793:1922000:1929718192971819308571140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase4e-0963.2
NC_011060:1288862:1305353130535313065941242Pelodictyon phaeoclathratiforme BU-1, complete genomeRNA-directed DNA polymerase4e-0963.2
NC_009483:2401209:2401209240120924025131305Geobacter uraniireducens Rf4 chromosome, complete genomeRNA-directed DNA polymerase6e-0962.8
NC_010718:1959517:1966127196612719673951269Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)7e-0962.4
NC_010718:2513917:2535266253526625365341269Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)7e-0962.4
NC_008346:2251353:2254331225433122557791449Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein6e-0962.4
NC_008346:1431051:1443157144315714446051449Syntrophomonas wolfei subsp. wolfei str. Goettingen, completehypothetical protein6e-0962.4
NC_017201:117485:1238691238691251671299Bacillus thuringiensis serovar finitimus YBT-020 plasmid pBMB26,hypothetical protein8e-0962
NC_010321:2276000:2283171228317122845831413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase8e-0962
NC_010321:35855:4561645616470281413Thermoanaerobacter pseudethanolicus ATCC 33223 chromosome, completeRNA-directed DNA polymerase9e-0962
NC_014964:35862:4562345623470351413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase9e-0962
NC_014964:923681:9315429315429329541413Thermoanaerobacter brockii subsp. finnii Ako-1 chromosome, completeRNA-directed DNA polymerase9e-0962
NC_015914:4248000:4259490425949042607521263Cyclobacterium marinum DSM 745 chromosome, complete genomeRNA-directed DNA polymerase1e-0862
NC_015458:2998000:2998197299819729997291533Pusillimonas sp. T7-7 chromosome, complete genomeRNA-directed DNA polymerase1e-0861.6
NC_009454:2502724:2519632251963225209181287Pelotomaculum thermopropionicum SI, complete genomeretron-type reverse transcriptase1e-0861.6
NC_015914:4248000:4265401426540142666631263Cyclobacterium marinum DSM 745 chromosome, complete genomeRNA-directed DNA polymerase1e-0861.6
NC_017249:8221992:8267715826771582690971383Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein1e-0861.2
NC_010003:449192:4602484602484616661419Petrotoga mobilis SJ95, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)2e-0860.8
NC_010793:1922000:1924190192419019253291140Orientia tsutsugamushi str. Ikeda, complete genomereverse transcriptase2e-0860.8
NC_020291:5641444:5645748564574856471061359Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeretron-type reverse transcriptase2e-0860.8
NC_015160:937317:9387709387709401131344Odoribacter splanchnicus DSM 20712 chromosome, complete genomehypothetical protein3e-0860.5
NC_013921:1977444:1977444197744419788561413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0860.5
NC_013921:2293411:2294928229492822963401413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0860.5
NC_013921:1396500:1396798139679813982101413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0860.5
NC_013921:1396500:1400425140042514018371413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0860.5
NC_013921:80856:1000881000881015001413Thermoanaerobacter italicus Ab9 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0860.5
NC_015958:677500:6866716866716880831413Thermoanaerobacter wiegelii Rt8.B1 chromosome, complete genomeRNA-directed DNA polymerase2e-0860.5
NC_010468:2406387:2411676241167624129981323Escherichia coli ATCC 8739, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-0859.7
NC_013223:724394:7518867518867532111326Desulfohalobium retbaense DSM 5692, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-0859.7
NC_011059:65414:8611386113875941482Prosthecochloris aestuarii DSM 271, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)4e-0859.7
NC_014387:1528000:1528019152801915294131395Butyrivibrio proteoclasticus B316 chromosome 1, complete genomeRNA-dependent DNA polymerase6e-0859.3
NC_019978:416637:4230104230104241611152Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase6e-0859.3
NC_014538:187747:1949691949691963811413Thermoanaerobacter sp. X513 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-0859.3
NC_010320:143109:1551031551031565151413Thermoanaerobacter sp. X514 chromosome, complete genomeRNA-directed DNA polymerase5e-0859.3
NC_005126:1265071:1274750127475012761591410Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein8e-0858.9
NC_019897:2645404:2653914265391426552121299Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase8e-0858.9
NC_019897:4014485:4033591403359140348891299Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase8e-0858.9
NC_010995:3745957:3788975378897537901831209Cellvibrio japonicus Ueda107, complete genomeputative maturase8e-0858.9
NC_008209:2367500:2375796237579623770761281Roseobacter denitrificans OCh 114, complete genomeputative reverse transcriptase/maturase family protein1e-0758.5
NC_013385:1064188:1080741108074110820811341Ammonifex degensii KC4, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)9e-0858.5
NC_016627:4270949:4279507427950742808051299Clostridium clariflavum DSM 19732 chromosome, complete genomeRetron-type reverse transcriptase9e-0858.5
NC_016627:4270949:4281408428140842827061299Clostridium clariflavum DSM 19732 chromosome, complete genomeRetron-type reverse transcriptase9e-0858.5
NC_016514:891772:9032249032249043961173Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein1e-0758.2
NC_014973:595153:6085916085916099101320Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase1e-0758.2
NC_019978:39000:5139351393525081116Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase2e-0757.8
NC_019978:2220863:2222614222261422237771164Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase2e-0757.4
NC_019970:2080419:2095698209569820971041407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase2e-0757.4
NC_019970:2551607:2574597257459725760031407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase2e-0757.4
NC_019970:510632:5207095207095221151407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase2e-0757.4
NC_014973:4503054:4518889451888945202291341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-0757.4
NC_014973:1257625:1266921126692112682611341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-0757.4
NC_014973:2425994:2433276243327624346161341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-0757.4
NC_014973:1257625:1272068127206812734081341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase2e-0757.4
NC_019978:1477724:1484210148421014853611152Halobacteroides halobius DSM 5150, complete genomeRetron-type reverse transcriptase2e-0757.4
NC_011059:670345:6709046709046721391236Prosthecochloris aestuarii DSM 271, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0757
NC_014973:3414459:3442836344283634441761341Geobacter sp. M18 chromosome, complete genomeRNA-directed DNA polymerase3e-0757
NC_008639:2968000:3012714301271430141951482Chlorobium phaeobacteroides DSM 266, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0757
NC_010718:1454087:1459727145972714611541428Natranaerobius thermophilus JW/NM-WN-LF, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)3e-0757
NC_015164:2961906:2984079298407929854161338Bacteroides salanitronis DSM 18170 chromosome, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)6e-0756.2
NC_008800:1300500:1310337131033713115571221Yersinia enterocolitica subsp. enterocolitica 8081 chromosome,putative maturase protein6e-0756.2
NC_007298:750361:7604137604137617021290Dechloromonas aromatica RCB, complete genomeRNA-directed DNA polymerase (Reverse transcriptase)5e-0756.2
NC_014228:1712339:1738743173874317400771335Xenorhabdus nematophila ATCC 19061, complete genomePutative reverse transcriptase6e-0755.8
NC_017249:7993713:8065217806521780664611245Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein6e-0755.8
NC_006177:1254635:1256307125630712575961290Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase7e-0755.8
NC_007512:944941:991184991184992020837Pelodictyon luteolum DSM 273, complete genomehypothetical protein7e-0755.8
NC_015733:3736104:3764353376435337656061254Pseudomonas putida S16 chromosome, complete genomereverse transcriptase1e-0655.5
NC_017986:331610:3373573373573386101254Pseudomonas putida ND6 chromosome, complete genomereverse transcriptase1e-0655.5
NC_015733:864959:8899838899838912151233Pseudomonas putida S16 chromosome, complete genomereverse transcriptase9e-0755.5
NC_015737:1441086:1452717145271714539881272Clostridium sp. SY8519, complete genomehypothetical protein1e-0655.1
NC_012471:719000:7467347467347482391506Streptococcus equi subsp. equi 4047, complete genomegroup II intron reverse transcriptase/maturase1e-0655.1
NC_006177:12383:3152131521328101290Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase1e-0655.1
NC_015968:74124:8484884848860801233Enterobacter asburiae LF7a chromosome, complete genomeRNA-directed DNA polymerase1e-0655.1
NC_019897:128610:1414831414831428741392Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase1e-0654.7
NC_020911:1859210:1869981186998118712701290Octadecabacter antarcticus 307, complete genomeputative reverse transcriptase2e-0654.7
NC_006177:2883476:2925725292572529269871263Symbiobacterium thermophilum IAM 14863, complete genomegroup II intron-encoding maturase, N-terminally truncated2e-0654.7
NC_006177:2883476:2925688292568829270081321Symbiobacterium thermophilum IAM 14863, complete genome2e-0654.7
NC_004116:560893:5693965693965707151320Streptococcus agalactiae 2603V/R, complete genomeprophage LambdaSa1, reverse transcriptase/maturase family protein2e-0654.7
NC_016023:1143130:1153368115336811547771410Bacillus coagulans 36D1 chromosome, complete genomeRNA-directed DNA polymerase2e-0654.7
NC_011060:2525367:2541825254182525440082184Pelodictyon phaeoclathratiforme BU-1, complete genomeCRISPR-associated protein Cas12e-0653.9
NC_008639:2358592:2379403237940323815982196Chlorobium phaeobacteroides DSM 266, complete genomeCRISPR-associated protein Cas12e-0653.9
NC_019897:128610:1464991464991478901392Thermobacillus composti KWC4 chromosome, complete genomeRetron-type reverse transcriptase3e-0653.5
NC_019970:439969:4441624441624455681407Thermoanaerobacterium thermosaccharolyticum M0795, complete genomeRetron-type reverse transcriptase3e-0653.5
NC_018866:1706000:1712113171211317134741362Dehalobacter sp. DCA chromosome, complete genomeRetron-type reverse transcriptase4e-0653.5
NC_008346:331820:3628403628403641711332Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeRNA-directed DNA polymerase (reverse transcriptase)4e-0653.1
NC_010337:616304:6364406364406375641125Heliobacterium modesticaldum Ice1, complete genomereverse transcriptase family protein6e-0652.8
NC_016935:1636278:1636278163627816376691392Paenibacillus mucilaginosus 3016 chromosome, complete genomeRNA-directed DNA polymerase1e-0552