Query: NC_010519:2033980 Haemophilus somnus 2336 chromosome, complete genome
Start: 2033980, End: 2054599, Length: 20620
Host Lineage: Histophilus somni; Histophilus; Pasteurellaceae; Pasteurellales; Proteobacteria; Bacteria
General Information: This strain was isolated from the lung of a calf which had pneumonia. A group of organisms that are either obligate parasites or commensal organisms found in animal mucous membranes. Almost all species require the presence of important growth factors found in the blood of their hosts, including either X factor (protoporphyrin IX or heme) or V factor (nicotinamide adenine dinucleotide (NAD or NADP)). This organism is a major cause of disease in feedlot cattle. It causes constriction of blood vessels supplying major organs, restricting blood supply which leads to reduced oxygen delivery, and leads to tissue damage and death. The diseases that result are pneumonia, arthritis, myocarditis (inflammation of heart muscle), and reproductive problems resulting in the loss of millions of dollars in animals each year.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_008309:1851189* | 1851189 | 1879447 | 28259 | Haemophilus somnus 129PT, complete genome | 0 | 7842 | BLASTN svg | BLASTP svg |
NC_008309:502983* | 502983 | 529268 | 26286 | Haemophilus somnus 129PT, complete genome | 0 | 7184 | BLASTN svg | BLASTP svg |
NC_009053:2025782* | 2025782 | 2049047 | 23266 | Actinobacillus pleuropneumoniae L20, complete genome | 0 | 712 | BLASTN svg | BLASTP svg |
NC_010939:405477* | 405477 | 447424 | 41948 | Actinobacillus pleuropneumoniae serovar 7 str. AP76, complete | 1e-51 | 212 | BLASTN svg | BLASTP svg |
NC_009053:393700* | 393700 | 419642 | 25943 | Actinobacillus pleuropneumoniae L20, complete genome | 1e-51 | 212 | BLASTN svg | BLASTP svg |
NC_008309:190550 | 190550 | 222599 | 32050 | Haemophilus somnus 129PT, complete genome | 1e-29 | 139 | BLASTN svg | BLASTP svg |
NC_008309:1155218 | 1155218 | 1178249 | 23032 | Haemophilus somnus 129PT, complete genome | 5e-23 | 117 | BLASTN svg | BLASTP svg |
NC_015224:4473230* | 4473230 | 4497145 | 23916 | Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome, | 2e-22 | 115 | BLASTN svg | BLASTP svg |
NC_012214:3931824* | 3931824 | 3954599 | 22776 | Erwinia pyrifoliae Ep1/96, complete genome | 3e-21 | 111 | BLASTN svg | BLASTP svg |
NC_014934:11341* | 11341 | 39795 | 28455 | Cellulophaga algicola DSM 14237 chromosome, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_008309:1827809 | 1827809 | 1851140 | 23332 | Haemophilus somnus 129PT, complete genome | 7e-16 | 93.7 | BLASTN svg | BLASTP svg |
NC_013961:3709800* | 3709800 | 3731825 | 22026 | Erwinia amylovora, complete genome | 3e-15 | 91.7 | BLASTN svg | BLASTP svg |
NC_015224:3587500 | 3587500 | 3617679 | 30180 | Yersinia enterocolitica subsp. palearctica 105.5R(r) chromosome, | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_013166:1149760* | 1149760 | 1173066 | 23307 | Kangiella koreensis DSM 16069, complete genome | 1e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_008309:842072 | 842072 | 869315 | 27244 | Haemophilus somnus 129PT, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_008309:1200245* | 1200245 | 1218599 | 18355 | Haemophilus somnus 129PT, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_006905:3780000* | 3780000 | 3802968 | 22969 | Salmonella enterica subsp. enterica serovar Choleraesuis str | 7e-13 | 83.8 | BLASTN svg | BLASTP svg |
NC_008309:385592 | 385592 | 409099 | 23508 | Haemophilus somnus 129PT, complete genome | 4e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010102:283364* | 283364 | 306245 | 22882 | Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7, | 2e-10 | 75.8 | BLASTN svg | BLASTP svg |
NC_012912:1200000* | 1200000 | 1226940 | 26941 | Dickeya zeae Ech1591, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_008309:1289370 | 1289370 | 1314906 | 25537 | Haemophilus somnus 129PT, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_004337:3590323* | 3590323 | 3952993 | 362671 | Shigella flexneri 2a str. 301, complete genome | 4e-08 | 67.9 | BLASTN svg | BLASTP svg |
NC_015277:380624* | 380624 | 404611 | 23988 | Sphingobacterium sp. 21 chromosome, complete genome | 2e-06 | 61.9 | BLASTN svg | BLASTP svg |