Pre_GI: BLASTN Hits

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Query: NC_010513:1443787 Xylella fastidiosa M12 chromosome, complete genome

Start: 1443787, End: 1470279, Length: 26493

Host Lineage: Xylella fastidiosa; Xylella; Xanthomonadaceae; Xanthomonadales; Proteobacteria; Bacteria

General Information: Causal agent of citrus variegated chlorosis. This organism was first identified in 1993 as the causal agent of citrus variegated chlorosis, a disease that affects varieties of sweet oranges. This disease was first noticed in Brazil in 1987, and it greatly affects commercial orchards resulting in crop devastation worldwide. Other strains of this species cause a range of diseases in mulberry, pear, almond, elm, sycamore, oak, maple, pecan and coffee which collectively result in multimillion dollar devastation of economically important plants. The bacteria are transmitted from the gut of the insect vector (sharpshooter leafhopper) to the plant xylem (water conducting system) when the insect feeds. Xylella fastidiosa is similar to Xanthomonas campestris pv. campestris in that it produces a wide variety of pathogenic factors for colonization in a host-specific manner including a large number of fimbrial and afimbrial adhesins for attachment. It does not contain a type III secretion system, but possesses genes for a type II secretion system for export of exoenzymes that degrade the plant cell wall and allow the bacterium to colonize the plant xylem. The cell produces an exopolysaccharide that is similar to the xanthan gum produced by Xanthomonas campestris pv. campestris.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_007947:48582848582850833122504Methylobacillus flagellatus KT, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014752:83461683461687970445089Neisseria lactamica ST-640, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_004129:195347*19534722067225326Pseudomonas fluorescens Pf-5, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012791:4736084*4736084478464848565Variovorax paradoxus S110 chromosome 1, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_012792:10916691091669111509923431Variovorax paradoxus S110 chromosome 2, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_010717:47877504787750482298935240Xanthomonas oryzae pv. oryzae PXO99A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002488:84237784237786661724241Xylella fastidiosa 9a5c, complete genome05412BLASTN svgBLASTP svg
NC_002488:2070975*2070975208947618502Xylella fastidiosa 9a5c, complete genome04805BLASTN svgBLASTP svg
NC_002488:2657274*2657274268649929226Xylella fastidiosa 9a5c, complete genome02627BLASTN svgBLASTP svg
NC_010577:20932612093261211764024380Xylella fastidiosa M23, complete genome07503BLASTN svgBLASTP svg
NC_010577:2513241*2513241254349930259Xylella fastidiosa M23, complete genome02547BLASTN svgBLASTP svg
NC_010577:1456909*1456909148269825790Xylella fastidiosa M23, complete genome09036BLASTN svgBLASTP svg
NC_010577:11884381188438121515026713Xylella fastidiosa M23, complete genome08687BLASTN svgBLASTP svg
NC_004556:14420001442000145968117682Xylella fastidiosa Temecula1, complete genome04831BLASTN svgBLASTP svg
NC_004556:2495712*2495712251907123360Xylella fastidiosa Temecula1, complete genome02547BLASTN svgBLASTP svg
NC_004556:11788971178897120511726221Xylella fastidiosa Temecula1, complete genome08687BLASTN svgBLASTP svg
NC_004556:20780002078000210180823809Xylella fastidiosa Temecula1, complete genome07739BLASTN svgBLASTP svg