Pre_GI: BLASTN Hits

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Query: NC_010501:5442000 Pseudomonas putida W619, complete genome

Start: 5442000, End: 5465408, Length: 23409

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_015183:2483653*2483653251000626354Agrobacterium sp. H13-3 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_003063:30496230496233428329322Agrobacterium tumefaciens str. C58 chromosome linear, complete7e-0763.9BLASTN svgBLASTP svg
NC_003305:17439391743939177259928661Agrobacterium tumefaciens str. C58 chromosome linear, complete7e-0763.9BLASTN svgBLASTP svg
NC_018704:81733*8173311606034328Amphibacillus xylanus NBRC 15112, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_011567:2327870*2327870234959921730Anoxybacillus flavithermus WK1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011567:139598*13959816123721640Anoxybacillus flavithermus WK1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011567:388358*38835841678028423Anoxybacillus flavithermus WK1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_007716:266500*26650029609929600Aster yellows witches'-broom phytoplasma AYWB, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013854:3200912*3200912322443023519Azospirillum sp. B510, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_021150:49296704929670497270143032Azotobacter vinelandii CA6, complete genome1e-42182BLASTN svgBLASTP svg
NC_012560:49296834929683497271443032Azotobacter vinelandii DJ, complete genome1e-42182BLASTN svgBLASTP svg
NC_020272:3706722*3706722373604029319Bacillus amyloliquefaciens IT-45, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020410:198000*19800022508227083Bacillus amyloliquefaciens subsp. plantarum UCMB5036 complete2e-0765.9BLASTN svgBLASTP svg
UCMB5137:276121*27612129641620296Bacillus atrophaeus UCMB-51371e-0869.9BLASTN svgBLASTP svg
NC_006582:4256915*4256915428739230478Bacillus clausii KSM-K16, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014219:83888*8388810707623189Bacillus selenitireducens MLS10 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014219:2931796*2931796295390522110Bacillus selenitireducens MLS10 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014976:1174430*1174430119919524766Bacillus subtilis BSn5 chromosome, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_020301:85326785326787983926573Bartonella vinsonii subsp. berkhoffii str. Winnie, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_002929:52500*525008147528976Bordetella pertussis Tohama I, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015662:15641*156413886623226Buchnera aphidicola (Cinara tujafilina) chromosome, complete2e-0765.9BLASTN svgBLASTP svg
NC_004545:15650*156506959953950Buchnera aphidicola str. Bp (Baizongia pistaciae), complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008513:13484*134843562522142Buchnera aphidicola str. Cc (Cinara cedri), complete genome2e-0765.9BLASTN svgBLASTP svg
NC_004061:31500*315005549924000Buchnera aphidicola str. Sg (Schizaphis graminum), complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014117:442616*44261651580273187Burkholderia sp. CCGE1002 chromosome chromosome 1, complete8e-19103BLASTN svgBLASTP svg
NC_014909:219498*21949824042420927Candidatus Blochmannia vafer str. BVAF chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_016024:275845*27584529878822944Candidatus Chloracidobacterium thermophilum B chromosome chromosome5e-1487.7BLASTN svgBLASTP svg
NC_010544:850502*85050287932828827Candidatus Phytoplasma australiense, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007963:31137393113739313569421956Chromohalobacter salexigens DSM 3043, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_003030:3763054*3763054378965126598Clostridium acetobutylicum ATCC 824, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015687:3766000*3766000379114625147Clostridium acetobutylicum DSM 1731 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_011898:2907017*2907017292585518839Clostridium cellulolyticum H10, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_014328:4546390*4546390457009623707Clostridium ljungdahlii ATCC 49587 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008593:37456*374566080623351Clostridium novyi NT, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_021182:4427468*4427468445021222745Clostridium pasteurianum BC1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_004369:37110937110940147530367Corynebacterium efficiens YS-314, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_014844:442380*44238048618443805Desulfovibrio aespoeensis Aspo-2 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_014216:20975002097500212022822729Desulfurivibrio alkaliphilus AHT2 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_006831:664000*66400068952525526Ehrlichia ruminantium str. Gardel, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_006832:668913*66891369389724985Ehrlichia ruminantium str. Welgevonden, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005295:689500*68950071405024551Ehrlichia ruminantium str. Welgevonden, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010694:2492378*2492378251782925452Erwinia tasmaniensis, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_008563:14755001475500149389218393Escherichia coli APEC O1, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010468:4455201*4455201447359918399Escherichia coli ATCC 8739, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_009801:14193241419324143859919276Escherichia coli E24377A, complete genome1e-0869.9BLASTN svgBLASTP svg
CU928160:4248621*4248621427441825798Escherichia coli IAI1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_011750:4543135*4543135456499721863Escherichia coli IAI39 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_000913:4159090*4159090417760618517Escherichia coli K12, complete genome1e-0869.9BLASTN svgBLASTP svg
CP002516:2580774*2580774260629825525Escherichia coli KO11, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010473:4256000*4256000427821222213Escherichia coli str. K-12 substr. DH10B, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007946:3683371*3683371370609922729Escherichia coli UTI89, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_018665:71677*716779339521719Exiguobacterium antarcticum B7 chromosome, complete genome5e-23117BLASTN svgBLASTP svg
NC_018665:139646*13964615884819203Exiguobacterium antarcticum B7 chromosome, complete genome3e-21111BLASTN svgBLASTP svg
NC_010556:71776*717769345921684Exiguobacterium sibiricum 255-15, complete genome5e-23117BLASTN svgBLASTP svg
NC_010556:26567*265674534518779Exiguobacterium sibiricum 255-15, complete genome2e-22115BLASTN svgBLASTP svg
NC_010556:141374*14137416268521312Exiguobacterium sibiricum 255-15, complete genome3e-21111BLASTN svgBLASTP svg
NC_012673:1540000*1540000156249622497Exiguobacterium sp. AT1b, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012673:2152639*2152639217371821080Exiguobacterium sp. AT1b, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_012673:1650139*1650139166872118583Exiguobacterium sp. AT1b, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_010376:606000*60600062469418695Finegoldia magna ATCC 29328, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010376:186510*18651024309956590Finegoldia magna ATCC 29328, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_015672:470000*47000049397723978Flexistipes sinusarabici DSM 4947 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_003454:249304*24930426978820485Fusobacterium nucleatum subsp. nucleatum ATCC 25586, complete7e-0763.9BLASTN svgBLASTP svg
NC_011852:1482343*1482343150488322541Haemophilus parasuis SH0165, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007645:6350079*6350079637233822260Hahella chejuensis KCTC 2396, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007645:38704663870466392303252567Hahella chejuensis KCTC 2396, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_014532:35960973596097363859942503Halomonas elongata DSM 2581, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_010337:98974*9897412939030417Heliobacterium modesticaldum Ice1, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014323:39763513976351403850962159Herbaspirillum seropedicae SmR1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009648:3720000*3720000374226022261Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_013192:469771*46977149651726747Leptotrichia buccalis DSM 1135, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_006055:183823*18382321230928487Mesoplasma florum L1, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_010172:3413392*3413392343676823377Methylobacterium extorquens PA1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007633:790881*79088182774836868Mycoplasma capricolum subsp. capricolum ATCC 27343, complete7e-0763.9BLASTN svgBLASTP svg
NC_014751:772912*77291280869035779Mycoplasma leachii PG50 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_000912:553539*55353957905125513Mycoplasma pneumoniae M129, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015711:5479879*5479879550459924721Myxococcus fulvus HW-1 chromosome, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_020126:4430142*4430142445344823307Myxococcus stipitatus DSM 14675, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008767:804655*80465582578721133Neisseria meningitidis FAM18, complete genome3e-18101BLASTN svgBLASTP svg
NC_003116:1018813*1018813104163622824Neisseria meningitidis Z2491, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_015731:3274739*3274739330258727849Nitrosomonas sp. Is79A3 chromosome, complete genome8e-19103BLASTN svgBLASTP svg
NC_014761:1321187*1321187134459923413Oceanithermus profundus DSM 14977 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004193:79588*7958811154731960Oceanobacillus iheyensis HTE831, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_004193:241480*24148026554624067Oceanobacillus iheyensis HTE831, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_005303:553500*55350057580722308Onion yellows phytoplasma OY-M, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_013421:3117639*3117639314038322745Pectobacterium wasabiae WPP163, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_013061:987744*987744100953721794Pedobacter heparinus DSM 2366, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_015177:2642368*2642368266519022823Pedobacter saltans DSM 12145 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
NC_008027:55333115533311555523921929Pseudomonas entomophila L48, complete genome03309BLASTN svgBLASTP svg
NC_007492:3462929*3462929350940646478Pseudomonas fluorescens PfO-1, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_007492:85742885742888733529908Pseudomonas fluorescens PfO-1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009439:4661102*4661102468191020809Pseudomonas mendocina ymp, complete genome1e-174620BLASTN svgBLASTP svg
NC_020209:5077410*5077410511615938750Pseudomonas poae RE*1-1-14, complete genome1e-63252BLASTN svgBLASTP svg
NC_009512:755658*75565878272327066Pseudomonas putida F1, complete genome1e-171611BLASTN svgBLASTP svg
NC_009512:43754524375452440539429943Pseudomonas putida F1, complete genome9e-31143BLASTN svgBLASTP svg
NC_015733:1555476*1555476160259947124Pseudomonas putida S16 chromosome, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_010501:4379920*4379920440315523236Pseudomonas putida W619, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome01501BLASTN svgBLASTP svg
NC_009434:28147428147430109919626Pseudomonas stutzeri A1501, complete genome4e-30141BLASTN svgBLASTP svg
NC_005773:17688517688520456427680Pseudomonas syringae pv. phaseolicola 1448A, complete genome2e-130474BLASTN svgBLASTP svg
NC_005773:56366065636606566314526540Pseudomonas syringae pv. phaseolicola 1448A, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007005:58259255825925584413718213Pseudomonas syringae pv. syringae B728a, complete genome1e-131478BLASTN svgBLASTP svg
NC_004578:60899586089958612236632409Pseudomonas syringae pv. tomato str. DC3000, complete genome0718BLASTN svgBLASTP svg
NC_015677:89667389667391821221540Ramlibacter tataouinensis TTB310 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_014833:3667748*3667748368799920252Ruminococcus albus 7 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014833:1539678*1539678155896019283Ruminococcus albus 7 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_015703:5272193*5272193530097228780Runella slithyformis DSM 19594 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_010067:3204682*3204682322388819207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete2e-1075.8BLASTN svgBLASTP svg
NC_006511:4119332*4119332413716217831Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC1e-0869.9BLASTN svgBLASTP svg
NC_003198:3586000*3586000360812122122Salmonella enterica subsp. enterica serovar Typhi str. CT18,1e-0869.9BLASTN svgBLASTP svg
NC_020064:3157656*3157656318828830633Serratia marcescens FGI94, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_020211:16210001621000164274521746Serratia marcescens WW4, complete genome4e-73283BLASTN svgBLASTP svg
NC_015566:3659318*3659318367796918652Serratia sp. AS12 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_008258:2045000*2045000206275017751Shigella flexneri 5 str. 8401, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007384:2933625*2933625295770924085Shigella sonnei Ss046, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_003911:3453764*3453764347948625723Silicibacter pomeroyi DSS-3, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_003911:1078949*1078949111287933931Silicibacter pomeroyi DSS-3, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_014364:81534681534687725361908Spirochaeta smaragdinae DSM 11293 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_012121:1444633*1444633146884124209Staphylococcus carnosus subsp. carnosus TM300, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_012121:139741*13974118060640866Staphylococcus carnosus subsp. carnosus TM300, complete genome7e-0763.9BLASTN svgBLASTP svg
NC_018870:22328572232857225309920243Thermacetogenium phaeum DSM 12270 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_019897:3025871*3025871304870622836Thermobacillus composti KWC4 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_019940:1670262*1670262169388723626Thioflavicoccus mobilis 8321 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015577:2081196*2081196213114449949Treponema azotonutricium ZAS-9 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008786:17673151767315179053023216Verminephrobacter eiseniae EF01-2, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011184:2723000*2723000274162818629Vibrio fischeri MJ11 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_011184:2421687*2421687244877527089Vibrio fischeri MJ11 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_004344:589375*58937561664427270Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,5e-1487.7BLASTN svgBLASTP svg