Pre_GI: BLASTN Hits

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Query: NC_010501:3987615 Pseudomonas putida W619, complete genome

Start: 3987615, End: 4017567, Length: 29953

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_008782:32520923252092327781225721Acidovorax sp. JS42, complete genome7e-23117BLASTN svgBLASTP svg
NC_008570:2768795*2768795279764928855Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009348:18932921893292191741424123Aeromonas salmonicida subsp. salmonicida A449, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_009348:2034500*2034500205759923100Aeromonas salmonicida subsp. salmonicida A449, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_008260:2021162*2021162204220421043Alcanivorax borkumensis SK2, complete genome6e-1487.7BLASTN svgBLASTP svg
NC_021150:19652641965264198887523612Azotobacter vinelandii CA6, complete genome0739BLASTN svgBLASTP svg
NC_012560:19652511965251198886223612Azotobacter vinelandii DJ, complete genome0739BLASTN svgBLASTP svg
NC_002696:2829002*2829002285565626655Caulobacter crescentus CB15, complete genome4e-21111BLASTN svgBLASTP svg
NC_014100:1144463*1144463117100626544Caulobacter segnis ATCC 21756 chromosome, complete genome7e-29137BLASTN svgBLASTP svg
NC_010338:4015928*4015928404982733900Caulobacter sp. K31, complete genome7e-29137BLASTN svgBLASTP svg
NC_008010:44965244965246986420213Deinococcus geothermalis DSM 11300 plasmid 1, complete sequence4e-0661.9BLASTN svgBLASTP svg
NC_008789:2057368*2057368208046723100Halorhodospira halophila SL1, complete genome3e-37165BLASTN svgBLASTP svg
NC_006369:28887012888701290683418134Legionella pneumophila str. Lens, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_006368:30282863028286305492626641Legionella pneumophila str. Paris, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_002942:29432062943206296445521250Legionella pneumophila subsp. pneumophila str. Philadelphia 1,6e-0867.9BLASTN svgBLASTP svg
NC_008825:27006172700617271935418738Methylibium petroleiphilum PM1, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_020126:46223714622371465424731877Myxococcus stipitatus DSM 14675, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014752:13635621363562138602122460Neisseria lactamica ST-640, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_008767:13632881363288138639123104Neisseria meningitidis FAM18, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_018524:2246225*2246225228118534961Nocardiopsis alba ATCC BAA-2165 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_014210:26387732638773266766328891Nocardiopsis dassonvillei subsp. dassonvillei DSM 43111 chromosome,4e-0661.9BLASTN svgBLASTP svg
NC_008027:18470401847040187459927560Pseudomonas entomophila L48, complete genome02252BLASTN svgBLASTP svg
NC_008027:2621443*2621443264643624994Pseudomonas entomophila L48, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015410:22588002258800228509926300Pseudomonas mendocina NK-01 chromosome, complete genome0837BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015733:41300004130000414900419005Pseudomonas putida S16 chromosome, complete genome01562BLASTN svgBLASTP svg
NC_015733:443122*44312246159918478Pseudomonas putida S16 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_015733:1793399*1793399181802124623Pseudomonas putida S16 chromosome, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_015733:42539614253961427610922149Pseudomonas putida S16 chromosome, complete genome6e-0867.9BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome4e-0971.9BLASTN svgBLASTP svg
NC_010501:4989455*4989455501446425010Pseudomonas putida W619, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010501:34483893448389347837429986Pseudomonas putida W619, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_009434:20065002006500203099424495Pseudomonas stutzeri A1501, complete genome3e-99371BLASTN svgBLASTP svg
NC_015740:18453701845370186638521016Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete2e-100375BLASTN svgBLASTP svg
NC_015740:26143172614317265004935733Pseudomonas stutzeri ATCC 17588 = LMG 11199 chromosome, complete1e-1283.8BLASTN svgBLASTP svg
NC_015566:24202872420287243917718891Serratia sp. AS12 chromosome, complete genome1e-76295BLASTN svgBLASTP svg
NC_015567:24201692420169243905918891Serratia sp. AS9 chromosome, complete genome1e-76295BLASTN svgBLASTP svg
NC_014831:65408*654088880223395Thermaerobacter marianensis DSM 12885 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_008786:557314*55731457994722634Verminephrobacter eiseniae EF01-2, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009720:2424975*2424975244520720233Xanthobacter autotrophicus Py2, complete genome9e-0763.9BLASTN svgBLASTP svg
NC_016010:1169850*1169850119450124652Xanthomonas axonopodis pv. citrumelo F1 chromosome, complete3e-22115BLASTN svgBLASTP svg
NC_007508:1221500*1221500126063139132Xanthomonas campestris pv. vesicatoria str. 85-10, complete genome3e-22115BLASTN svgBLASTP svg