Query: NC_010501:3448389 Pseudomonas putida W619, complete genome
Start: 3448389, End: 3478374, Length: 29986
Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria
General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.
Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!
Subject Island | Start | End | Length | Subject Host Description | E-value | Bit score | Visual BLASTN | Visual BLASTP |
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NC_010501:3013103 | 3013103 | 3036099 | 22997 | Pseudomonas putida W619, complete genome | 0 | 981 | BLASTN svg | BLASTP svg |
NC_015376:1185000 | 1185000 | 1204562 | 19563 | Burkholderia gladioli BSR3 chromosome chromosome 2, complete | 7e-171 | 609 | BLASTN svg | BLASTP svg |
NC_008027:3953951* | 3953951 | 3978510 | 24560 | Pseudomonas entomophila L48, complete genome | 2e-85 | 325 | BLASTN svg | BLASTP svg |
NC_007953:1434705 | 1434705 | 1458122 | 23418 | Burkholderia xenovorans LB400 chromosome 3, complete sequence | 4e-83 | 317 | BLASTN svg | BLASTP svg |
NC_009512:3618055* | 3618055 | 3638599 | 20545 | Pseudomonas putida F1, complete genome | 6e-51 | 210 | BLASTN svg | BLASTP svg |
NC_009512:1518113 | 1518113 | 1555880 | 37768 | Pseudomonas putida F1, complete genome | 9e-47 | 196 | BLASTN svg | BLASTP svg |
NC_002947:5386489 | 5386489 | 5414167 | 27679 | Pseudomonas putida KT2440, complete genome | 1e-42 | 182 | BLASTN svg | BLASTP svg |
NC_008027:3844355 | 3844355 | 3886296 | 41942 | Pseudomonas entomophila L48, complete genome | 1e-33 | 153 | BLASTN svg | BLASTP svg |
NC_008027:5576458 | 5576458 | 5598518 | 22061 | Pseudomonas entomophila L48, complete genome | 2e-32 | 149 | BLASTN svg | BLASTP svg |
NC_008027:2331617 | 2331617 | 2357625 | 26009 | Pseudomonas entomophila L48, complete genome | 3e-31 | 145 | BLASTN svg | BLASTP svg |
NC_010501:734363 | 734363 | 769099 | 34737 | Pseudomonas putida W619, complete genome | 5e-30 | 141 | BLASTN svg | BLASTP svg |
NC_008027:4889662* | 4889662 | 4919645 | 29984 | Pseudomonas entomophila L48, complete genome | 3e-25 | 125 | BLASTN svg | BLASTP svg |
NC_014532:2066074 | 2066074 | 2090607 | 24534 | Halomonas elongata DSM 2581, complete genome | 1e-21 | 113 | BLASTN svg | BLASTP svg |
NC_008027:896000* | 896000 | 919649 | 23650 | Pseudomonas entomophila L48, complete genome | 4e-21 | 111 | BLASTN svg | BLASTP svg |
NC_010501:3575726 | 3575726 | 3605099 | 29374 | Pseudomonas putida W619, complete genome | 6e-17 | 97.6 | BLASTN svg | BLASTP svg |
NC_010524:4644587* | 4644587 | 4689822 | 45236 | Leptothrix cholodnii SP-6, complete genome | 3e-16 | 95.6 | BLASTN svg | BLASTP svg |
NC_008463:4566976* | 4566976 | 4603076 | 36101 | Pseudomonas aeruginosa UCBPP-PA14, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_007760:3655433 | 3655433 | 3696187 | 40755 | Anaeromyxobacter dehalogenans 2CP-C, complete genome | 2e-14 | 89.7 | BLASTN svg | BLASTP svg |
NC_014217:4550544 | 4550544 | 4589157 | 38614 | Starkeya novella DSM 506 chromosome, complete genome | 2e-13 | 85.7 | BLASTN svg | BLASTP svg |
NC_003911:2540453 | 2540453 | 2567521 | 27069 | Silicibacter pomeroyi DSS-3, complete genome | 6e-11 | 77.8 | BLASTN svg | BLASTP svg |
NC_010676:2658495 | 2658495 | 2709197 | 50703 | Burkholderia phytofirmans PsJN chromosome 2, complete sequence | 9e-10 | 73.8 | BLASTN svg | BLASTP svg |
NC_010552:2131021 | 2131021 | 2149582 | 18562 | Burkholderia ambifaria MC40-6 chromosome 2, complete sequence | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010557:316000 | 316000 | 339172 | 23173 | Burkholderia ambifaria MC40-6 chromosome 3, complete sequence | 9e-07 | 63.9 | BLASTN svg | BLASTP svg |
NC_010501:3987615* | 3987615 | 4017567 | 29953 | Pseudomonas putida W619, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_010002:4175809* | 4175809 | 4199211 | 23403 | Delftia acidovorans SPH-1, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_008027:5533311 | 5533311 | 5555239 | 21929 | Pseudomonas entomophila L48, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_002947:6152500 | 6152500 | 6185499 | 33000 | Pseudomonas putida KT2440, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |
NC_002947:4994335 | 4994335 | 5049356 | 55022 | Pseudomonas putida KT2440, complete genome | 4e-06 | 61.9 | BLASTN svg | BLASTP svg |