Pre_GI: BLASTN Hits

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Query: NC_010501:3448389 Pseudomonas putida W619, complete genome

Start: 3448389, End: 3478374, Length: 29986

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010501:30131033013103303609922997Pseudomonas putida W619, complete genome0981BLASTN svgBLASTP svg
NC_015376:11850001185000120456219563Burkholderia gladioli BSR3 chromosome chromosome 2, complete7e-171609BLASTN svgBLASTP svg
NC_008027:3953951*3953951397851024560Pseudomonas entomophila L48, complete genome2e-85325BLASTN svgBLASTP svg
NC_007953:14347051434705145812223418Burkholderia xenovorans LB400 chromosome 3, complete sequence4e-83317BLASTN svgBLASTP svg
NC_009512:3618055*3618055363859920545Pseudomonas putida F1, complete genome6e-51210BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome9e-47196BLASTN svgBLASTP svg
NC_002947:53864895386489541416727679Pseudomonas putida KT2440, complete genome1e-42182BLASTN svgBLASTP svg
NC_008027:38443553844355388629641942Pseudomonas entomophila L48, complete genome1e-33153BLASTN svgBLASTP svg
NC_008027:55764585576458559851822061Pseudomonas entomophila L48, complete genome2e-32149BLASTN svgBLASTP svg
NC_008027:23316172331617235762526009Pseudomonas entomophila L48, complete genome3e-31145BLASTN svgBLASTP svg
NC_010501:73436373436376909934737Pseudomonas putida W619, complete genome5e-30141BLASTN svgBLASTP svg
NC_008027:4889662*4889662491964529984Pseudomonas entomophila L48, complete genome3e-25125BLASTN svgBLASTP svg
NC_014532:20660742066074209060724534Halomonas elongata DSM 2581, complete genome1e-21113BLASTN svgBLASTP svg
NC_008027:896000*89600091964923650Pseudomonas entomophila L48, complete genome4e-21111BLASTN svgBLASTP svg
NC_010501:35757263575726360509929374Pseudomonas putida W619, complete genome6e-1797.6BLASTN svgBLASTP svg
NC_010524:4644587*4644587468982245236Leptothrix cholodnii SP-6, complete genome3e-1695.6BLASTN svgBLASTP svg
NC_008463:4566976*4566976460307636101Pseudomonas aeruginosa UCBPP-PA14, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_007760:36554333655433369618740755Anaeromyxobacter dehalogenans 2CP-C, complete genome2e-1489.7BLASTN svgBLASTP svg
NC_014217:45505444550544458915738614Starkeya novella DSM 506 chromosome, complete genome2e-1385.7BLASTN svgBLASTP svg
NC_003911:25404532540453256752127069Silicibacter pomeroyi DSS-3, complete genome6e-1177.8BLASTN svgBLASTP svg
NC_010676:26584952658495270919750703Burkholderia phytofirmans PsJN chromosome 2, complete sequence9e-1073.8BLASTN svgBLASTP svg
NC_010552:21310212131021214958218562Burkholderia ambifaria MC40-6 chromosome 2, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_010557:31600031600033917223173Burkholderia ambifaria MC40-6 chromosome 3, complete sequence9e-0763.9BLASTN svgBLASTP svg
NC_010501:3987615*3987615401756729953Pseudomonas putida W619, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_010002:4175809*4175809419921123403Delftia acidovorans SPH-1, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_008027:55333115533311555523921929Pseudomonas entomophila L48, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002947:61525006152500618549933000Pseudomonas putida KT2440, complete genome4e-0661.9BLASTN svgBLASTP svg
NC_002947:49943354994335504935655022Pseudomonas putida KT2440, complete genome4e-0661.9BLASTN svgBLASTP svg