Pre_GI: BLASTN Hits

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Query: NC_010501:3013103 Pseudomonas putida W619, complete genome

Start: 3013103, End: 3036099, Length: 22997

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_010501:34483893448389347837429986Pseudomonas putida W619, complete genome0981BLASTN svgBLASTP svg
NC_007005:48577684857768488033522568Pseudomonas syringae pv. syringae B728a, complete genome2e-96361BLASTN svgBLASTP svg
NC_002947:34040003404000342808524086Pseudomonas putida KT2440, complete genome2e-81311BLASTN svgBLASTP svg
NC_008027:33873663387366341245025085Pseudomonas entomophila L48, complete genome2e-72281BLASTN svgBLASTP svg
NC_009512:31189073118907313838119475Pseudomonas putida F1, complete genome3e-24121BLASTN svgBLASTP svg
NC_004129:5846415*5846415588159935185Pseudomonas fluorescens Pf-5, complete genome5e-20107BLASTN svgBLASTP svg
NC_007760:36554333655433369618740755Anaeromyxobacter dehalogenans 2CP-C, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_011770:14317401431740145393822199Pseudomonas aeruginosa LESB58, complete genome8e-1693.7BLASTN svgBLASTP svg
NC_004129:34528853452885349484041956Pseudomonas fluorescens Pf-5, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_009512:15181131518113155588037768Pseudomonas putida F1, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_007651:36564333656433367931922887Burkholderia thailandensis E264 chromosome I, complete sequence2e-0765.9BLASTN svgBLASTP svg
NC_007650:841408414010870224563Burkholderia thailandensis E264 chromosome II, complete sequence2e-0765.9BLASTN svgBLASTP svg