Pre_GI: BLASTP Hits

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Query: NC_010501:908000:936912 Pseudomonas putida W619, complete genome

Start: 936912, End: 938102, Length: 1191

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_018691:198909:2080422080422092111170Alcanivorax dieselolei B5 chromosome, complete genomehypothetical protein3e-28126
NC_014931:5594946:5601242560124256025161275Variovorax paradoxus EPS chromosome, complete genomeresponse regulator receiver protein2e-26120
NC_012791:4680500:4686977468697746882601284Variovorax paradoxus S110 chromosome 1, complete genomeresponse regulator receiver protein2e-25117
NC_008260:228475:2375632375632387621200Alcanivorax borkumensis SK2, complete genomehypothetical protein3e-25116
NC_008609:2933468:2941865294186529429861122Pelobacter propionicus DSM 2379, complete genomeresponse regulator receiver protein1e-1687.8
NC_016002:2453919:2493044249304424942911248Pseudogulbenkiania sp. NH8B, complete genomeresponse regulator receiver protein1e-1481.6
NC_010334:2749250:2759782275978227610081227Shewanella halifaxensis HAW-EB4, complete genomeFlp pilus assembly protein ATPase CpaE-like protein1e-1274.7
NC_013223:1349000:1367450136745013686191170Desulfohalobium retbaense DSM 5692, complete genomeresponse regulator receiver protein9e-1271.6
NC_016613:2759908:2776913277691327781601248Vibrio sp. EJY3 chromosome 1, complete sequencetype II/IV secretion system ATPase TadZ/CpaE associated with Flp pilus assembly1e-0964.3
NC_007498:2046935:2048257204825720494351179Pelobacter carbinolicus DSM 2380, complete genomeFlp pilus assembly ATPase CpaE2e-0860.5
NC_007614:2675302:2682285268228526835231239Nitrosospira multiformis ATCC 25196 chromosome 1, completeresponse regulator receiver domain protein (CheY-like)4e-0859.7
NC_009901:2427291:2443277244327724445031227Shewanella pealeana ATCC 700345, complete genomeFlp pilus assembly protein ATPase CpaE-like protein9e-0858.2
NC_014830:532122:5425065425065436751170Intrasporangium calvum DSM 43043 chromosome, complete genomecobyrinic acid a,c-diamide synthase1e-0758.2
NC_011886:2950411:2977231297723129784271197Arthrobacter chlorophenolicus A6, complete genomeFlp pilus assembly protein ATPase CpaE-like protein2e-0757.4
NC_015594:332432:3402883402883414931206Sphingobium chlorophenolicum L-1 chromosome chromosome 2, completeresponse regulator receiver protein9e-0755.1
NC_016884:813000:8235658235658247611197Sulfobacillus acidophilus DSM 10332 chromosome, complete genomeCobyrinic acid ac-diamide synthase5e-0652.4
NC_015757:2844599:2853504285350428546911188Sulfobacillus acidophilus TPY chromosome, complete genomeresponse regulator receiver protein6e-0652.4