Pre_GI: BLASTP Hits

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Query: NC_010501:4311873:4323361 Pseudomonas putida W619, complete genome

Start: 4323361, End: 4323723, Length: 363

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010501:2796000:2809651280965128113361686Pseudomonas putida W619, complete genomeYD repeat protein9e-24108
NC_010501:4311873:4315143431514343193034161Pseudomonas putida W619, complete genomeYD repeat protein1e-23108
NC_010501:2796000:2801626280162628058614236Pseudomonas putida W619, complete genomeYD repeat protein1e-23107
NC_017986:5605197:5619164561916456213202157Pseudomonas putida ND6 chromosome, complete genomeYD repeat-containing protein2e-23107
NC_017986:5605197:5606290560629056104924203Pseudomonas putida ND6 chromosome, complete genomeYD repeat-containing protein2e-23107
NC_002947:3492379:3511330351133035154874158Pseudomonas putida KT2440, complete genomerhs-related protein2e-23107
NC_017986:5605197:5614253561425356174953243Pseudomonas putida ND6 chromosome, complete genomeYD repeat-containing protein3e-23106
NC_017986:5605197:562297756229775623882906Pseudomonas putida ND6 chromosome, complete genomeYD repeat-containing protein2e-22104
NC_015733:1793399:1800624180062418028192196Pseudomonas putida S16 chromosome, complete genome2e-22104
NC_017986:5605197:5611106561110656137062601Pseudomonas putida ND6 chromosome, complete genomeYD repeat-containing protein2e-22104
NC_007005:5882205:5911246591124659154754230Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat1e-2098.6
NC_007005:5882205:5918400591840059210032604Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat1e-2098.2
NC_005773:5734733:5751579575157957557844206Pseudomonas syringae pv. phaseolicola 1448A, complete genomeRHS family protein1e-2098.2
NC_015138:2110149:2113250211325021180044755Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRHS repeat-associated core domain-containing protein2e-1581.3
NC_015379:6714545:6719349671934967237674419Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein3e-1477.4
NC_020209:4643901:4648647464864746530204374Pseudomonas poae RE*1-1-14, complete genomehypothetical protein3e-1477
NC_007952:1934249:1945900194590019504954596Burkholderia xenovorans LB400 chromosome 2, complete sequenceYD repeat protein1e-1375.1
NC_007511:719493:7243637243637287034341Burkholderia sp. 383 chromosome 2, complete sequenceRhs family protein2e-1374.7
NC_008752:3684739:3695033369503336997844752Acidovorax avenae subsp. citrulli AAC00-1, complete genomeYD repeat protein3e-1373.6
NC_015379:6714545:6714545671454567189844440Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,hypothetical protein7e-1372.4
NC_020209:4643901:4643901464390146482714371Pseudomonas poae RE*1-1-14, complete genomehypothetical protein8e-1372.4
NC_002947:4604582:4613627461362746182194593Pseudomonas putida KT2440, complete genomeRHS family protein, putative1e-1271.6
NC_002947:4604582:462502846250284625936909Pseudomonas putida KT2440, complete genome2e-1271.2
NC_002947:4604582:4621660462166046231351476Pseudomonas putida KT2440, complete genome2e-1271.2
NC_008752:3828438:3841274384127438460344761Acidovorax avenae subsp. citrulli AAC00-1, complete genomeYD repeat protein7e-1165.9
NC_015138:3809732:3822203382220338269184716Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRHS repeat-associated core domain-containing protein7e-1165.9
NC_007005:5882205:5916253591625359176951443Pseudomonas syringae pv. syringae B728a, complete genomeYD repeat1e-1065.5
NC_008752:3828438:3838572383857238402331662Acidovorax avenae subsp. citrulli AAC00-1, complete genomeYD repeat protein1e-1065.1
NC_011001:2517159:2523520252352025247691250Burkholderia cenocepacia J2315 chromosome 2, complete sequence4e-1063.5
NC_013421:2613137:2630966263096626350124047Pectobacterium wasabiae WPP163, complete genomeRHS protein1e-0961.6
NC_015138:4246787:4250507425050742552674761Acidovorax avenae subsp. avenae ATCC 19860 chromosome, completeRHS repeat-associated core domain-containing protein2e-0961.2
NC_011205:329155:3318333318333355193687Salmonella enterica subsp. enterica serovar Dublin str. CT_020218533e-0960.5
NC_016810:329849:3325213325213361233603Salmonella enterica subsp. enterica serovar Typhimurium strRhs family protein3e-0960.5
NC_016857:329849:3325213325213361233603Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Rhs1 protein3e-0960.5
NC_003197:332086:3325513325513366454095Salmonella typhimurium LT2, complete genomeputative RHS-like protein3e-0960.5
NC_016856:332771:3332363332363373304095Salmonella enterica subsp. enterica serovar Typhimurium str. 14028Sputative RHS-like protein3e-0960.5
NC_016860:332087:3325523325523366464095Salmonella enterica subsp. enterica serovar Typhimurium strputative RHS-like protein3e-0960.5
NC_016863:332060:3325253325253366194095Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1putative RHS-like protein3e-0960.5
NC_017046:329847:3338333338333361212289Salmonella enterica subsp. enterica serovar Typhimurium str. 798Rhs-family protein (SPI-6 associated)4e-0960.1
NC_011080:333121:3357993357993398784080Salmonella enterica subsp. enterica serovar Newport str. SL254,Rhs-family protein4e-0960.1
NC_011094:334267:3347323347323384183687Salmonella enterica subsp. enterica serovar Schwarzengrund str4e-0960.1
NC_003198:331314:3313143313143353784065Salmonella enterica subsp. enterica serovar Typhi str. CT18,Rhs-family protein4e-0960.1
NC_009778:3832000:3857813385781338618324020Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein6e-0959.3
NC_011002:703194:7243577243577286044248Burkholderia cenocepacia J2315 chromosome 3, complete sequenceRHS-family protein8e-0958.9
NC_008752:3007073:3010865301086530156734809Acidovorax avenae subsp. citrulli AAC00-1, complete genomeYD repeat protein1e-0858.5
NC_011083:338910:3416753416753463814707Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,Rhs-family protein2e-0857.8
NC_006905:326517:3270393270393318204782Salmonella enterica subsp. enterica serovar Choleraesuis strRhs-family protein2e-0857.8
NC_011205:329155:3379063379063406802775Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853Rhs family protein2e-0857.4
NC_011294:311796:3132203132203165943375Salmonella enterica subsp. enterica serovar Enteritidis str3e-0857.4
NC_016832:2612809:2639016263901626415472532Salmonella enterica subsp. enterica serovar Typhi str. P-stx-12,Rhs-family protein6e-0856.2
NC_003198:331314:3364663364663389972532Salmonella enterica subsp. enterica serovar Typhi str. CT18,Rhs-family protein6e-0856.2
NC_012125:326909:3269093269093316904782Salmonella enterica subsp. enterica serovar Paratyphi C strainRhs family protein1e-0755.5
NC_016514:2713834:2748218274821827526064389Enterobacter cloacae EcWSU1 chromosome, complete genomeRhsB2e-0754.7
NC_014121:1589389:1591543159154315959314389Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completehypothetical protein2e-0754.7
NC_012792:385670:3900783900783949074830Variovorax paradoxus S110 chromosome 2, complete genomeRHS protein3e-0753.9
NC_016816:1852659:1864699186469918691534455Pantoea ananatis LMG 5342, complete genomeRHS Repeat family protein2e-0651.2
NC_013956:2592378:2604874260487426089774104Pantoea ananatis LMG 20103 chromosome, complete genomeRhsD2e-0651.2
NC_007510:409843:4141824141824188644683Burkholderia sp. 383 chromosome 1, complete sequenceRhs family protein7e-0649.3