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Query: NC_010501:4080937:4103773 Pseudomonas putida W619, complete genome

Start: 4103773, End: 4104078, Length: 306

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.

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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_002947:4931476:495443949544394954744306Pseudomonas putida KT2440, complete genomeanti-sigma F factor antagonist, putative7e-42168
NC_021150:3505234:350945135094513509756306Azotobacter vinelandii CA6, complete genomeantisigma-factor antagonist STAS domain protein1e-24111
NC_012560:3505235:350945235094523509757306Azotobacter vinelandii DJ, complete genomeantisigma-factor antagonist STAS domain protein1e-24111
NC_007645:3227098:324000332400033240320318Hahella chejuensis KCTC 2396, complete genomeAnti-anti-sigma regulatory factor (antagonist of anti-sigma factor)3e-1270.5
NC_009654:3849774:388386738838673884169303Marinomonas sp. MWYL1, complete genomeanti-sigma-factor antagonist9e-1268.9
NC_007298:778723:804899804899805204306Dechloromonas aromatica RCB, complete genomeSulfate transporter/antisigma-factor antagonist STAS4e-1063.5
NC_007912:2768363:277404127740412774430390Saccharophagus degradans 2-40, complete genomeFlagellar basal-body rod protein FlgB6e-0959.3
NC_004460:1237129:125657912565791256878300Vibrio vulnificus CMCP6 chromosome II, complete sequenceAnti-anti-sigma regulatory factor2e-0651.2
NC_005140:1820970:184089418408941841193300Vibrio vulnificus YJ016 chromosome II, complete sequenceanti-anti-sigma regulatory factor2e-0651.2