Pre_GI: BLASTP Hits

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Query: NC_010501:4080937:4095880 Pseudomonas putida W619, complete genome

Start: 4095880, End: 4096656, Length: 777

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017986:4374979:437995243799524380728777Pseudomonas putida ND6 chromosome, complete genomeflagellar biosynthesis protein FliR3e-114411
NC_009512:1691930:169690316969031697679777Pseudomonas putida F1, complete genomeflagellar biosynthetic protein FliR3e-114411
NC_002947:4931476:494658249465824947358777Pseudomonas putida KT2440, complete genomeflagellar biosynthesis protein8e-113406
NC_004129:1848701:185379718537971854564768Pseudomonas fluorescens Pf-5, complete genomeflagellar biosynthesis protein3e-92337
NC_007492:1735595:173754017375401738325786Pseudomonas fluorescens PfO-1, complete genomeflagellar biosynthesis protein7e-91333
NC_009654:3849774:387610238761023876884783Marinomonas sp. MWYL1, complete genomeflagellar biosynthetic protein FliR9e-43173
NC_014366:1814000:183494918349491835728780Gamma proteobacterium HdN1, complete genomeFlagellar biosynthesis protein FliR4e-41168
NC_013851:3300278:330354133035413304323783Allochromatium vinosum DSM 180 chromosome, complete genomeflagellar biosynthetic protein FliR3e-40165
NC_019940:293476:300920300920301693774Thioflavicoccus mobilis 8321 chromosome, complete genomeflagellar biosynthetic protein FliR1e-36153
NC_009792:2688747:268874726887472689520774Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein6e-28124
NC_014562:1844268:187554118755411876326786Pantoea vagans C9-1 chromosome, complete genomeFlagellar biosynthetic protein fliR1e-25117
NC_009381:522731:550850550850551623774Yersinia pestis Pestoides F chromosome, complete genomeflagellar assembly protein8e-24110
NC_003143:741169:770010770010770783774Yersinia pestis CO92, complete genomeputative flagellar assembly protein8e-24110
NC_008149:650706:678873678873679646774Yersinia pestis Nepal516, complete genomeflagellar assembly protein8e-24110
NC_005810:3333000:336121233612123361985774Yersinia pestis biovar Microtus str. 91001, complete genomeflagellar biosynthetic protein FliR8e-24110
NC_010515:1618093:165436216543621655159798Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceflagellar biosynthetic protein FliR2e-22105
NC_020911:2921925:294200629420062942833828Octadecabacter antarcticus 307, complete genomeflagellar biosynthetic protein FliR2e-2099.8
NC_013892:2689645:269080526908052691587783Xenorhabdus bovienii SS-2004 chromosome, complete genomeflagellar biosynthetic protein, regulator9e-2097.4
NC_009012:574145:595409595409596194786Clostridium thermocellum ATCC 27405, complete genometype III secretion system inner membrane R protein2e-1892.4
NC_004344:26828:550395503955815777Wigglesworthia glossinidia endosymbiont of Glossina brevipalpis,hypothetical protein9e-1890.9
NC_013223:685628:707734707734708516783Desulfohalobium retbaense DSM 5692, complete genomeflagellar biosynthetic protein FliR8e-1890.9
NC_021182:2883716:2896408289640828982371830Clostridium pasteurianum BC1, complete genomeflagellar biosynthetic protein FlhB/flagellar biosynthetic protein FliR2e-1789.7
NC_014377:1089894:108913310891331089897765Thermosediminibacter oceani DSM 16646 chromosome, complete genomeflagellar biosynthetic protein FliR1e-1584
NC_020409:168916:186269186269187060792Desulfovibrio piezophilus str. nov C1TLV30 chromosome, completeFlagellar biosynthetic protein fliR3e-1582.4
NC_014652:628435:650982650982651764783Caldicellulosiruptor hydrothermalis 108 chromosome, completeflagellar biosynthetic protein flir5e-1581.6
NC_007759:1356439:135849013584901359269780Syntrophus aciditrophicus SB, complete genomeflagellar biosynthetic protein1e-1480.1
NC_008346:983816:984925984925985686762Syntrophomonas wolfei subsp. wolfei str. Goettingen, completeflagellar biosynthetic protein FliR2e-1479.7
NC_009253:2615777:261684126168412617608768Desulfotomaculum reducens MI-1 chromosome, complete genomeflagellar biosynthesis protein FliR1e-1377
NC_000918:1353310:137854913785491379325777Aquifex aeolicus VF5, complete genomeflagellar biosynthetic protein FliR5e-1374.7
NC_016894:2931213:293522829352282935983756Acetobacterium woodii DSM 1030 chromosome, complete genomeflagellar biosynthesis protein FliR2e-1272.8
NC_012791:2386000:240507724050772405796720Variovorax paradoxus S110 chromosome 1, complete genometype III secretion system inner membrane R protein2e-1272.8
NC_017243:1499757:150607415060741506835762Brachyspira intermedia PWS/A chromosome, complete genomeflagellar biosynthetic protein fliR3e-1272
NC_012225:377441:381131381131381892762Brachyspira hyodysenteriae WA1, complete genomeflagellar biosynthetic protein fliR5e-1271.6
NC_018664:1663324:166832816683281669122795Clostridium acidurici 9a chromosome, complete genomeflagellar biosynthesis protein FliR1e-1170.5
NC_016893:43234:562395623957015777Wigglesworthia glossinidia endosymbiont of Glossina morsitansflagellar export pore protein1e-1170.1
NC_015391:2059191:207640620764062077098693Carnobacterium sp. 17-4 chromosome, complete genomeflagellar biosynthesis protein FliR2e-1169.7
NC_018604:1329228:133032913303291331132804Brachyspira pilosicoli WesB complete genomeflagellar biosynthesis protein FliR3e-1168.9
NC_018607:1134900:113600211360021136805804Brachyspira pilosicoli B2904 chromosome, complete genomeflagellar biosynthetic protein FliR3e-1168.9
NC_019908:852230:867123867123867926804Brachyspira pilosicoli P43/6/78 chromosome, complete genomeflagellar biosynthesis protein FliR3e-1168.9
NC_010723:833870:8508728508728527041833Clostridium botulinum E3 str. Alaska E43, complete genomeflagellar biosynthetic protein4e-1168.6
NC_021184:2238500:225729222572922258059768Desulfotomaculum gibsoniae DSM 7213, complete genomeflagellar biosynthetic protein FliR4e-1168.6
NC_014150:233194:249501249501250304804Brachyspira murdochii DSM 12563 chromosome, complete genomeflagellar biosynthetic protein FliR6e-1168.2
NC_010674:858397:8725658725658744061842Clostridium botulinum B str. Eklund 17B, complete genomeflagellar biosynthetic protein6e-1168.2
NC_014330:2409559:241229724122972413058762Brachyspira pilosicoli 95/1000 chromosome, complete genomeflagellar biosynthesis protein FliR6e-1168.2
NC_009997:2699644:270205427020542702854801Shewanella baltica OS195, complete genometype III secretion protein SpaR/YscT/HrcT8e-1167.4
NC_016901:2661971:266197126619712662771801Shewanella baltica OS678 chromosome, complete genometype III secretion protein SpaR/YscT/HrcT8e-1167.4
NC_014366:2513352:251499225149922515783792Gamma proteobacterium HdN1, complete genomeType III secretory pathway protein3e-1065.5
NC_009802:1525144:155836215583621559123762Campylobacter concisus 13826, complete genomeflagellar biosynthetic protein FliR1e-0963.5
NC_014328:1135854:1144086114408611459061821Clostridium ljungdahlii ATCC 49587 chromosome, complete genomebifunctional flagellar biosynthesis proteins FliR/FlhB2e-0962.8
NC_010520:2860960:2860960286096028627891830Clostridium botulinum A3 str. Loch Maree, complete genomeflagellar biosynthetic protein FliR/FlhB3e-0962.4
NC_013961:1622616:164856016485601649330771Erwinia amylovora, complete genomeSurface presentation of antigens protein SpaR6e-0961.6
NC_013971:1660144:168608816860881686858771Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein6e-0961.6
NC_010694:2971170:299086429908642991628765Erwinia tasmaniensis, complete genomeSurface presentation of antigens protein (Spa29 protein), Type III secretion apparatus4e-0961.6
NC_009698:2649453:2649453264945326512821830Clostridium botulinum A str. Hall chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB6e-0961.2
NC_008593:1103293:1122918112291811246451728Clostridium novyi NT, complete genomeflagellar biosynthetic protein FlhB2e-0859.3
NC_013971:2876733:289699928969992897763765Erwinia amylovora ATCC 49946 chromosome, complete genometype III secretion system protein4e-0858.9
NC_013961:851044:873537873537874301765Erwinia amylovora, complete genomeSurface presentation of antigens protein spaR4e-0858.9
NC_009617:4911595:4913794491379449156351842Clostridium beijerinckii NCIMB 8052 chromosome, complete genomebifunctional flagellar biosynthesis protein FliR/FlhB4e-0858.5
NC_012440:659646:664173664173664955783Persephonella marina EX-H1, complete genomeflagellar biosynthetic protein FliR5e-0858.2
NC_010694:2138000:215439321543932155121729Erwinia tasmaniensis, complete genomeType III secretion apparatus9e-0857.4
NC_020291:4903981:4924711492471149265491839Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genomeflagellar biosynthetic protein FlhB1e-0757
NC_014560:171931:176676176676177443768Helicobacter pylori SJM180 chromosome, complete genomeflagellar biosynthesis protein FliR3e-0755.8
NC_012214:2221702:224179622417962242566771Erwinia pyrifoliae Ep1/96, complete genomeSurface presentation of antigens protein (Spa29 protein), Type III secretion apparatus6e-0754.7
NC_015500:1337180:135676713567671357606840Treponema brennaborense DSM 12168 chromosome, complete genomeflagellar biosynthetic protein FliR9e-0754.3
NC_011126:555483:589051589051589827777Hydrogenobaculum sp. Y04AAS1, complete genometype III secretion system inner membrane R protein1e-0653.9
NC_010067:1507823:151635415163541517133780Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein1e-0653.5
NC_010102:1616530:162147916214791622126648Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,hypothetical protein2e-0653.1
NC_011205:1852665:185761418576141858393780Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853type III secretion apparatus protein SpaR/YscT/HrcT2e-0652.8
NC_011080:1470794:149909514990951499874780Salmonella enterica subsp. enterica serovar Newport str. SL254,type III secretion apparatus protein SpaR/YscT/HrcT2e-0652.8
NC_016831:1236786:126502812650281265807780Salmonella enterica subsp. enterica serovar Gallinarum/pullorumputative type III secretion protein2e-0652.8
NC_012125:2360815:236576423657642366543780Salmonella enterica subsp. enterica serovar Paratyphi C straintype III secretion protein2e-0652.8
NC_011294:1723852:172880117288011729580780Salmonella enterica subsp. enterica serovar Enteritidis strtype III secretion protein2e-0652.8
NC_015379:2999965:301423830142383014981744Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Flagellar biosynthetic protein3e-0652.4
NC_011094:1435347:146355914635591464338780Salmonella enterica subsp. enterica serovar Schwarzengrund strtype III secretion apparatus protein SpaR/YscT/HrcT4e-0652
NC_011149:1710601:171555017155501716329780Salmonella enterica subsp. enterica serovar Agona str. SL483,type III secretion apparatus protein SpaR/YscT/HrcT4e-0652
NC_003198:1621347:162629616262961627075780Salmonella enterica subsp. enterica serovar Typhi str. CT18,putative type III secretion protein4e-0652
NC_011147:1502096:150704515070451507824780Salmonella enterica subsp. enterica serovar Paratyphi A strtype III secretion protein6e-0651.6
NC_006511:1506915:151186415118641512643780Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCCputative type III secretion protein6e-0651.6
NC_014926:1381152:141077914107791411558780Thermovibrio ammonificans HB-1 chromosome, complete genomeflagellar biosynthetic protein FliR7e-0651.2
NC_011274:1763676:176862517686251769404780Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91type III secretion protein7e-0651.2
NC_011601:4096427:413005341300534130829777Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeT3SS structure protein EscT1e-0550.8