Pre_GI: BLASTP Hits

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Query: NC_010501:3575726:3597244 Pseudomonas putida W619, complete genome

Start: 3597244, End: 3597747, Length: 504

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017265:809943:828705828705829196492Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-86318
NC_008149:3556999:357602935760293576520492Yersinia pestis Nepal516, complete genomehypothetical protein1e-86318
NC_010465:893921:912664912664913155492Yersinia pseudotuberculosis YPIII, complete genometype VI secretion system effector, Hcp1 family1e-86318
NC_008150:844727:876138876138876629492Yersinia pestis Antiqua, complete genomehypothetical protein1e-86318
NC_010634:3720214:373921637392163739707492Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector1e-86318
NC_004088:3689000:370815337081533708644492Yersinia pestis KIM, complete genomehypothetical protein1e-86318
NC_005810:1467772:149117914911791491670492Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)1e-86318
NC_003143:1630000:166227416622741662765492Yersinia pestis CO92, complete genomehypothetical protein1e-86318
NC_005810:3917254:393870739387073939198492Yersinia pestis biovar Microtus str. 91001, complete genomehemolysin-coregulated protein (uncharacterized)1e-86318
NC_004088:2966331:298486729848672985358492Yersinia pestis KIM, complete genomehypothetical protein1e-86318
NC_006155:1756000:178167217816721782163492Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-86318
NC_003143:1059580:108004610800461080537492Yersinia pestis CO92, complete genomehypothetical protein1e-86318
NC_008150:317903:337604337604338095492Yersinia pestis Antiqua, complete genomehypothetical protein1e-86318
NC_008149:2802392:282093128209312821422492Yersinia pestis Nepal516, complete genomehypothetical protein1e-86318
NC_010634:1755548:178190317819031782394492Yersinia pseudotuberculosis PB1/+, complete genomeHcp1 family type VI secretion system effector1e-86318
NC_006155:3805640:382613538261353826626492Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-86318
NC_017265:2586729:260526826052682605759492Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-86318
NC_017168:3977767:399630639963063996797492Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-86318
NC_017168:3286:247372473725228492Yersinia pestis A1122 chromosome, complete genomehypothetical protein1e-86318
NC_017160:1628500:165435116543511654842492Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-86318
NC_017154:902739:922440922440922931492Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-86318
NC_017154:1644404:167385716738571674348492Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-86318
NC_014029:961522:980295980295980786492Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-86318
NC_009381:1682000:170220017022001702691492Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-86318
NC_009381:588137:606893606893607384492Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-86318
NC_009708:2788855:283854128385412839032492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-86318
NC_009708:874770:893523893523894014492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-86318
NC_014029:1702338:173178417317841732275492Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-86318
NC_009708:915814:938848938848939339492Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein2e-86317
NC_010159:3120642:314184631418463142337492Yersinia pestis Angola, complete genomehypothetical protein5e-86316
NC_010159:172469:181740181740182231492Yersinia pestis Angola, complete genomehypothetical protein5e-86316
NC_015062:130359:130359130359130850492Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencetype VI secretion system effector, Hcp1 family1e-85314
NC_017060:125480:127189127189127680492Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion system effector1e-85314
NC_016612:5600177:561645556164555616946492Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion system effector2e-83307
NC_010067:2529750:255257725525772553068492Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein4e-83306
NC_012731:2302974:230468523046852305176492Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein2e-82304
NC_009648:1487692:148940314894031489894492Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-82304
NC_020181:969599:989229989229989720492Enterobacter aerogenes EA1509E, complete genomePutative cytoplasmic protein USSDB7A3e-82303
NC_008563:3119284:312300631230063123497492Escherichia coli APEC O1, complete genomeputative hemolysin-coregulated protein6e-81299
NC_009832:1946401:196478119647811965272492Serratia proteamaculans 568, complete genomeprotein of unknown function DUF7964e-78290
NC_013956:4579759:459389845938984594425528Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein1e-77288
NC_012962:3568046:359502135950213595512492Photorhabdus asymbiotica, complete genomehypothetical protein8e-77285
NC_012962:3568046:358995535899553590446492Photorhabdus asymbiotica, complete genomehypothetical protein3e-76283
NC_005126:4919689:492595549259554926446492Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein1e-75281
NC_007348:2011957:201195720119572012442486Ralstonia eutropha JMP134 chromosome 2, complete sequenceProtein of unknown function DUF7961e-70264
NC_016590:1183470:120668812066881207173486Burkholderia sp. YI23 chromosome 3, complete sequencehypothetical protein2e-69260
NC_016835:128757:136918136918137409492Rahnella aquatilis CIP 78.65 = ATCC 33071 plasmid pRahaq201,type VI secretion system effector3e-69260
NC_012721:1395417:141887514188751419360486Burkholderia glumae BGR1 chromosome 2, complete genomeHemolysin-coregulated protein2e-67254
NC_014118:1171411:119129111912911191776486Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion system effector, Hcp1 family4e-67253
NC_014306:642152:650001650001650492492Erwinia billingiae Eb661, complete genomeVirulence factor for secretion apparatus1e-65248
NC_007712:254000:263569263569264048480Sodalis glossinidius str. 'morsitans', complete genomehypothetical protein6e-57219
NC_015061:2770856:278352327835232784008486Rahnella sp. Y9602 chromosome, complete genometype VI secretion system effector, Hcp1 family3e-55214
NC_010067:892729:919954919954920442489Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein7e-54209
NC_010067:51000:608906089061372483Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein2e-53207
NC_013850:4829455:483727848372784837769492Klebsiella variicola At-22 chromosome, complete genometype VI secretion system effector, Hcp1 family1e-50198
NC_015968:2195645:223124322312432231725483Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector4e-46183
NC_011283:4966471:497703349770334977512480Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion system effector5e-42169
NC_007517:306508:312033312033312518486Geobacter metallireducens GS-15, complete genomeprotein of unknown function DUF7963e-27120
NC_007492:2310793:233099623309962331511516Pseudomonas fluorescens PfO-1, complete genomeProtein of unknown function DUF7961e-24112
NC_008463:282565:288454288454288972519Pseudomonas aeruginosa UCBPP-PA14, complete genomeSecreted protein Hcp3e-24110
NC_009457:1068000:106810110681011068619519Vibrio cholerae O395 chromosome 2, complete sequencehcp protein2e-23108
NC_008027:896000:896182896182896700519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A2e-23108
NC_008027:558507:558507558507559025519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1B2e-23108
NC_008027:4889662:491355949135594914077519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1C2e-23108
NC_008027:3844355:387980238798023880302501Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 2A5e-23107
NC_008027:5576458:559406755940675594585519Pseudomonas entomophila L48, complete genomehemolysin co-regulated protein 1A3e-23107
NC_002505:1507860:150963215096321510150519Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, completehcp protein3e-23107
NC_012578:1465302:146707414670741467592519Vibrio cholerae M66-2 chromosome I, complete sequencehcp protein3e-23107
NC_012668:2115228:213392121339212134439519Vibrio cholerae MJ-1236 chromosome 1, complete sequenceHcp protein3e-23107
NC_016944:1504888:150666015066601507178519Vibrio cholerae IEC224 chromosome I, complete sequencehcp protein3e-23107
NC_016602:2037162:205442320544232054941519Vibrio furnissii NCTC 11218 chromosome 1, complete sequencehcp protein2e-22104
NC_009439:4913767:491983749198374920355519Pseudomonas mendocina ymp, complete genomehypothetical protein4e-22103
NC_020829:1307736:132614213261421326660519Pseudomonas denitrificans ATCC 13867, complete genomehypothetical protein4e-22103
NC_002947:4604582:461052046105204611035516Pseudomonas putida KT2440, complete genomehcp protein2e-21101
NC_016642:1234500:124842712484271248942516Pseudovibrio sp. FO-BEG1 chromosome, complete genometype VI secretion system effector6e-21100
NC_013421:57961:652456524565763519Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family6e-2096.7
NC_015559:2745570:275060527506052751123519Marinomonas posidonica IVIA-Po-181 chromosome, complete genometype VI secretion system effector, Hcp1 family6e-2096.7
NC_008563:258725:263718263718264236519Escherichia coli APEC O1, complete genomehypothetical protein1e-1995.9
NC_008253:257059:263065263065263583519Escherichia coli 536, complete genomehypothetical hemolysin co-regulated protein1e-1995.9
NC_007946:258747:263740263740264258519Escherichia coli UTI89, complete genomehypothetical protein1e-1995.9
NC_011751:256830:261820261820262338519Escherichia coli UMN026 chromosome, complete genomehypothetical protein1e-1995.9
NC_011742:258746:263739263739264257519Escherichia coli S88 chromosome, complete genomehypothetical protein1e-1995.9
NC_011149:1110642:111395011139501114468519Salmonella enterica subsp. enterica serovar Agona str. SL483,hcp1e-1995.9
NC_011274:1129686:113485311348531135371519Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein1e-1995.9
NC_014166:1751906:175350717535071754031525Arcobacter nitrofigilis DSM 7299 chromosome, complete genomeHcp1 family type VI secretion system effector1e-1995.5
NC_014500:3097362:313812731381273138645519Dickeya dadantii 3937 chromosome, complete genomeHcp2e-1995.1
NC_014500:894136:914093914093914611519Dickeya dadantii 3937 chromosome, complete genomeHcp3e-1994.7
NC_011745:258727:263724263724264242519Escherichia coli ED1a chromosome, complete genomehypothetical protein2e-1994.7
NC_010505:1205747:121487812148781215393516Methylobacterium radiotolerans JCM 2831, complete genometype VI secretion system effector, Hcp1 family3e-1994.4
NC_009436:3117661:315790631579063158064159Enterobacter sp. 638, complete genome3e-1994.4
NC_015968:4117835:412532441253244125842519Enterobacter asburiae LF7a chromosome, complete genomeHcp1 family type VI secretion system effector3e-1994.4
NC_002695:261235:264133264133264651519Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein3e-1994.4
CU928160:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomeConserved hypothetical protein Aec16 (Hcp-like)3e-1994.4
NC_002655:261236:264134264134264652519Escherichia coli O157:H7 EDL933, complete genomehypothetical protein3e-1994.4
NC_011353:261220:264118264118264636519Escherichia coli O157:H7 str. EC4115 chromosome, complete genomehypothetical protein3e-1994.4
NC_011741:256932:259913259913260431519Escherichia coli IAI1 chromosome, complete genomehypothetical protein3e-1994.4
NC_013008:261226:264124264124264642519Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein3e-1994.4
NC_013941:261094:264076264076264594519Escherichia coli O55:H7 str. CB9615 chromosome, complete genomeHcp3e-1994.4
NC_012912:1701231:171793717179371718455519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family5e-1993.6
NC_012912:2901021:291846629184662918984519Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family5e-1993.6
NC_016822:267758:273014273014273532519Shigella sonnei 53G, complete genomehemolysin co-regulated protein2e-1892
NC_008570:1986466:199051519905151991033519Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehemolysin co-regulated protein2e-1891.7
NC_014532:3596097:360886636088663609384519Halomonas elongata DSM 2581, complete genomeK068875e-1890.1
NC_009802:114749:147250147250147771522Campylobacter concisus 13826, complete genomesecreted protein Hcp7e-1889.7
NC_016612:4823529:484601848460184846158141Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein4e-1787.4
NC_016445:984856:986816986816987145330Vibrio cholerae O1 str. 2010EL-1786 chromosome 1, completehcp protein7e-1683.2
NC_004578:2797493:280387428038742804389516Pseudomonas syringae pv. tomato str. DC3000, complete genomesecreted protein Hcp2e-1478.2
NC_016845:575123:595870595870596085216Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,Hcp1 family type VI secretion system effector6e-1476.6
NC_009074:3559211:355975135597513560254504Burkholderia pseudomallei 668 chromosome I, complete sequencehypothetical protein4e-1373.9
NC_006350:3710641:371064137106413711144504Burkholderia pseudomallei K96243 chromosome 1, complete sequencehypothetical protein4e-1373.9
NC_009349:78000:780487804810171623669Aeromonas salmonicida subsp. salmonicida A449 plasmid 4, complete5e-1373.9
NC_007510:409843:426923426923427426504Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF7962e-1168.6
NC_008390:407315:427925427925428428504Burkholderia cepacia AMMD chromosome 1, complete sequenceprotein of unknown function DUF7962e-1168.6
NC_013421:553193:570784570784571158375Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family3e-1167.8
NC_015381:429940:452091452091452594504Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative hemolysin-coregulated protein5e-0857
NC_012912:844339:852670852670853137468Dickeya zeae Ech1591, complete genometype VI secretion system effector, Hcp1 family2e-0755.1
NC_014323:4619344:463245546324554632946492Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein2e-0755.1
NC_011147:4460726:450007645000764500606531Salmonella enterica subsp. enterica serovar Paratyphi A strhypothetical protein3e-0754.7
NC_012125:4716000:474863547486354749081447Salmonella enterica subsp. enterica serovar Paratyphi C straincytoplasmic protein1e-0652.4
NC_013421:4006085:401413340141334014612480Pectobacterium wasabiae WPP163, complete genometype VI secretion system effector, Hcp1 family1e-0652.4
NC_014310:785220:807927807927808430504Ralstonia solanacearum PSI07 megaplasmid, complete sequencesecretion system protein (evpc-like), hemolysin-coregulated protein8e-0649.7