Pre_GI: BLASTP Hits

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Query: NC_010501:3575726:3578580 Pseudomonas putida W619, complete genome

Start: 3578580, End: 3580166, Length: 1587

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_017060:125480:1543521543521559561605Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion-associated protein2e-160565
NC_009708:2788855:2815051281505128166521602Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeImpA domain-containing protein6e-155547
NC_010465:2820500:2845578284557828471791602Yersinia pseudotuberculosis YPIII, complete genometype VI secretion-associated protein, VC_A0119 family1e-154546
NC_009381:1682000:1682016168201616836171602Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein3e-154545
NC_012962:4427000:4435406443540644370071602Photorhabdus asymbiotica, complete genomehypothetical protein2e-152539
NC_008563:3119284:3139452313945231410891638Escherichia coli APEC O1, complete genomehypothetical protein4e-147521
NC_014121:1822895:1838342183834218399401599Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein VasJ1e-134480
NC_012731:2302974:2321926232192623235241599Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein7e-133474
NC_009648:1487692:1508599150859915101971599Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein8e-133474
NC_013956:4579759:4578161457816145797621602Pantoea ananatis LMG 20103 chromosome, complete genomehypothetical protein1e-132473
NC_016612:28451:5557555575571491575Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein3e-130465
NC_014837:3766426:3790283379028337918601578Pantoea sp. At-9b chromosome, complete genometype VI secretion-associated protein2e-120433
NC_007348:2011957:2029244202924420308181575Ralstonia eutropha JMP134 chromosome 2, complete sequenceImpA, N-terminal2e-105383
NC_014118:1171411:1171411117141111729971587Burkholderia sp. CCGE1002 chromosome chromosome 2, completetype VI secretion-associated protein, VC_A0119 family4e-102372
NC_010552:592154:6109656109656125481584Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion-associated protein, VC_A0119 family3e-98359
NC_012721:1395417:1397244139724413988301587Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein2e-95350
NC_009436:3117661:3152243315224331546182376Enterobacter sp. 638, complete genomeImpA domain-containing protein2e-63243
NC_016612:5600177:560294756029475603309363Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein7e-27122
NC_009656:3733913:3744965374496537465211557Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein1e-1894.7
NC_007517:306508:3065083065083088802373Geobacter metallireducens GS-15, complete genomeImpA-like2e-1171.2
NC_011274:1094379:1119872111987211211671296Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein3e-1067.4
NC_011205:1186097:1211580121158012129921413Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853ImpA domain-containing protein3e-1067.4
NC_011149:1077589:1098898109889811003101413Salmonella enterica subsp. enterica serovar Agona str. SL483,type VI secretion-associated protein, family4e-1067
NC_009648:3476000:349049334904933490885393Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein2e-0964.3
NC_005126:349658:3859733859733874061434Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-0964.3
NC_012962:293976:3057363057363070461311Photorhabdus asymbiotica, complete genomehypothetical protein1e-0758.5
NC_005126:349658:360430360430361113684Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-0757.8
NC_016902:3863932:3864680386468038660921413Escherichia coli KO11FL chromosome, complete genometype VI secretion-associated protein9e-0755.5
CP002516:3863932:3864680386468038660921413Escherichia coli KO11, complete genometype VI secretion-associated protein, VC_A0119 family9e-0755.5
CP002185:234719:2458112458112472231413Escherichia coli W, complete genomeImpA domain-containing protein9e-0755.5
NC_016822:246715:2578312578312592431413Shigella sonnei 53G, complete genomehypothetical protein9e-0755.5
NC_008740:4109000:4129370412937041308181449Marinobacter aquaeolei VT8, complete genomeImpA domain protein2e-0654.3