Pre_GI: BLASTP Hits

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Query: NC_010501:3575726:3576787 Pseudomonas putida W619, complete genome

Start: 3576787, End: 3578556, Length: 1770

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_009648:3476000:3493264349326434950241761Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein0870
NC_011283:942594:9445839445839463431761Klebsiella pneumoniae 342 chromosome, complete genometype VI secretion protein0868
NC_011742:3057444:3059155305915530609151761Escherichia coli S88 chromosome, complete genomehypothetical protein0858
NC_009708:2788855:2811602281160228133651764Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein0843
NC_010465:2820500:2842048284204828438111764Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0110 family0841
NC_012962:3568046:3576147357614735780301884Photorhabdus asymbiotica, complete genomehypothetical protein0840
NC_004088:2937077:2961156296115629629191764Yersinia pestis KIM, complete genomehypothetical protein0840
NC_009381:1655731:1678486167848616802491764Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein0840
NC_014029:1760948:1759221175922117609841764Yersinia pestis Z176003 chromosome, complete genomehypothetical protein0840
NC_017168:3948514:3972592397259239743551764Yersinia pestis A1122 chromosome, complete genometype VI secretion protein0840
NC_017265:2557476:2581554258155425833171764Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein0840
NC_014837:3766426:3788498378849837902521755Pantoea sp. At-9b chromosome, complete genometype VI secretion protein0819
NC_015062:130359:1467891467891485581770Rahnella sp. Y9602 plasmid pRAHAQ01, complete sequencetype VI secretion protein, VC_A0110 family0813
NC_017060:125480:1436191436191453881770Rahnella aquatilis HX2 plasmid PRA1, complete sequencetype VI secretion system protein ImpG0810
NC_012962:4427000:4433561443356144353211761Photorhabdus asymbiotica, complete genomehypothetical protein0805
NC_012731:2302974:2325154232515423269081755Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein0791
NC_009778:1956225:1974330197433019760991770Enterobacter sakazakii ATCC BAA-894, complete genomehypothetical protein0791
NC_013282:2026083:2053937205393720557271791Cronobacter turicensis, complete genomehypothetical protein0790
NC_009648:1487692:1512893151289315146471755Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein0790
NC_013971:465318:4653184653184670871770Erwinia amylovora ATCC 49946 chromosome, complete genomehypothetical protein0780
NC_016845:3238507:3238507323850732402701764Klebsiella pneumoniae subsp. pneumoniae HS11286 chromosome,hypothetical protein0775
NC_009648:2465613:2465613246561324673761764Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genomehypothetical protein0770
NC_011283:2103500:2119415211941521211781764Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein0768
NC_012731:3193880:3193880319388031956431764Klebsiella pneumoniae NTUH-K2044 chromosome, complete genomehypothetical protein0768
NC_016612:5600177:5600177560017756019401764Klebsiella oxytoca KCTC 1686 chromosome, complete genometype VI secretion system protein ImpG0766
NC_008253:2965573:2967749296774929692361488Escherichia coli 536, complete genomehypothetical protein0691
NC_014121:1822895:1841208184120818426591452Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completetype VI secretion system protein ImpG0656
NC_007348:2011957:2030836203083620326621827Ralstonia eutropha JMP134 chromosome 2, complete sequenceProtein of unknown function DUF879, bacterial1e-170600
NC_016626:400080:4264284264284282601833Burkholderia sp. YI23 plasmid byi_1p, complete sequencetype VI secretion protein4e-169595
NC_012721:1395417:1395417139541713972311815Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein7e-169594
NC_010552:592154:6125586125586143721815Burkholderia ambifaria MC40-6 chromosome 2, complete sequencetype VI secretion protein, VC_A0110 family1e-167590
NC_014539:3619511:3619511361951136214181908Burkholderia sp. CCGE1003 chromosome 1, complete sequencetype VI secretion protein1e-165583
NC_009255:2044291:2045370204537020471841815Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein2e-164579
NC_009255:1250939:1275306127530612771201815Burkholderia vietnamiensis G4 chromosome 2, complete sequencehypothetical protein3e-164578
NC_014306:4376012:4393907439390743956821776Erwinia billingiae Eb661, complete genomePutative type VI secretion protein, VCA0110 family7e-117421
NC_012721:710887:7279207279207296801761Burkholderia glumae BGR1 chromosome 2, complete genomehypothetical protein1e-108394
NC_005126:349658:3965083965083983551848Photorhabdus luminescens subsp. laumondii TTO1, complete genomehypothetical protein2e-78293
NC_013892:274297:2725012725012743331833Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein5e-72272
NC_014228:4331327:4352537435253743543691833Xenorhabdus nematophila ATCC 19061, complete genomeconserved hypothetical protein (probable component of the SST VI cluster)4e-70266
NC_017192:2216914:2241356224135622431251770Arcobacter sp. L, complete genomehypothetical protein5e-69262
NC_009656:3733913:3740495374049537422821788Pseudomonas aeruginosa PA7 chromosome, complete genomehypothetical protein5e-69262
NC_004578:2797493:2810191281019128119781788Pseudomonas syringae pv. tomato str. DC3000, complete genomehypothetical protein9e-69261
NC_014355:1865003:1894809189480918966231815Candidatus Nitrospira defluvii, complete genomehypothetical protein1e-67257
NC_013421:1143500:1160271116027111620371767Pectobacterium wasabiae WPP163, complete genometype VI secretion protein, VC_A0110 family3e-64246
NC_013592:1424560:1440971144097114427371767Dickeya dadantii Ech586, complete genometype VI secretion protein, VC_A0110 family3e-62239
NC_008570:1986466:2001166200116620029321767Aeromonas hydrophila subsp. hydrophila ATCC 7966, complete genomehypothetical protein8e-61235
NC_009348:2631759:2631759263175926335251767Aeromonas salmonicida subsp. salmonicida A449, complete genomehypothetical protein2e-60234
NC_002947:4604582:4604582460458246063481767Pseudomonas putida KT2440, complete genomehypothetical protein9e-60231
NC_012913:1832500:1840367184036718421181752Aggregatibacter aphrophilus NJ8700, complete genometype VI secretion protein, family3e-56220
NC_015968:4117835:4150631415063141524091779Enterobacter asburiae LF7a chromosome, complete genometype VI secretion protein1e-55218
NC_016822:267758:2677582677582696081851Shigella sonnei 53G, complete genometype VI secretion system protein ImpG9e-55215
NC_011274:1129686:1129686112968611315991914Salmonella enterica subsp. enterica serovar Gallinarum str. 287/91hypothetical protein2e-54214
NC_002947:3492379:3492379349237934941991821Pseudomonas putida KT2440, complete genomehypothetical protein3e-54213
NC_012997:1689583:1704648170464817064831836Teredinibacter turnerae T7901, complete genometype VI secretion protein, VC_A0110 family3e-54213
NC_012779:2619871:2636142263614226379831842Edwardsiella ictaluri 93-146, complete genomehypothetical protein4e-53209
NC_014323:4619344:4630000463000046318441845Herbaspirillum seropedicae SmR1 chromosome, complete genomehypothetical protein5e-53209
NC_007946:258747:2587472587472605881842Escherichia coli UTI89, complete genomehypothetical protein2e-52207
NC_008563:258725:2587252587252605751851Escherichia coli APEC O1, complete genomehypothetical protein2e-52207
NC_011742:258746:2587462587462606051860Escherichia coli S88 chromosome, complete genomehypothetical protein2e-52207
NC_011745:258727:2587272587272605861860Escherichia coli ED1a chromosome, complete genomehypothetical protein1e-52207
NC_010322:3084834:3103089310308931049091821Pseudomonas putida GB-1 chromosome, complete genometype VI secretion protein3e-52206
NC_008253:257059:2580722580722599221851Escherichia coli 536, complete genomehypothetical protein3e-52206
NC_013855:196778:1994361994362012321797Azospirillum sp. B510 plasmid pAB510a, complete sequencehypothetical protein5e-51202
NC_020064:2921809:2940498294049829423841887Serratia marcescens FGI94, complete genometype VI secretion protein, VC_A0110 family5e-51202
NC_015663:4129685:4147851414785141497221872Enterobacter aerogenes KCTC 2190 chromosome, complete genometype VI secretion system protein ImpG1e-50201
NC_016816:1823127:1841046184104618429231878Pantoea ananatis LMG 5342, complete genometype VI secretion system, core protein1e-49198
NC_009079:402891:4010234010234028941872Burkholderia mallei NCTC 10247 chromosome I, complete sequencehypothetical protein4e-49196
NC_008835:1827905:1828980182898018308511872Burkholderia mallei NCTC 10229 chromosome I, complete sequencehypothetical protein4e-49196
NC_014306:679888:6975726975726994491878Erwinia billingiae Eb661, complete genomeType VI secretion system, VCA0110 family4e-49196
NC_007511:1780500:1800285180028518021561872Burkholderia sp. 383 chromosome 2, complete sequenceprotein of unknown function DUF8795e-49196
NC_011751:256830:2568302568302586891860Escherichia coli UMN026 chromosome, complete genomehypothetical protein6e-49196
NC_009832:3313058:3311175331117533130611887Serratia proteamaculans 568, complete genomeprotein of unknown function DUF8791e-48194
NC_016514:2713834:2772085277208527739621878Enterobacter cloacae EcWSU1 chromosome, complete genomehypothetical protein4e-48192
NC_018868:973379:9831459831459849741830Simiduia agarivorans SA1 = DSM 21679 chromosome, complete genomehypothetical protein1e-47191
NC_017075:2689014:2708160270816027100071848Rubrivivax gelatinosus IL144, complete genomehypothetical protein2e-47191
NC_007510:409843:4280534280534298881836Burkholderia sp. 383 chromosome 1, complete sequenceprotein of unknown function DUF8791e-46188
NC_008390:407315:4290544290544308891836Burkholderia cepacia AMMD chromosome 1, complete sequenceprotein of unknown function DUF8793e-46187
NC_013282:1256769:1264615126461512664951881Cronobacter turicensis, complete genomehypothetical protein1e-45184
NC_010084:3173757:3201485320148532033201836Burkholderia multivorans ATCC 17616 chromosome 1, completetype VI secretion protein7e-44179
NC_015963:117178:1349951349951367911797Enterobacter asburiae LF7a plasmid pENTAS01, complete sequencetype VI secretion protein2e-41170
NC_011748:3360967:3382898338289833847001803Escherichia coli 55989, complete genomehypothetical protein1e-40168
CU928145:3360967:3382898338289833847001803Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein1e-40168
NC_015381:4070968:4074700407470040765771878Burkholderia gladioli BSR3 chromosome 1, complete sequencehypothetical protein2e-40167
NC_015136:813701:8148068148068177632958Burkholderia sp. CCGE1001 chromosome 1, complete sequencetype VI secretion protein7e-40165
NC_007651:3064530:3102518310251831045001983Burkholderia thailandensis E264 chromosome I, complete sequenceBacterial protein of unknown function (DUF879) superfamily9e-40165
NC_010625:670482:6710606710606729491890Burkholderia phymatum STM815 plasmid pBPHY01, complete sequencetype VI secretion protein, VC_A0110 family2e-39164
NC_007511:2072838:2092755209275520946741920Burkholderia sp. 383 chromosome 2, complete sequenceprotein of unknown function DUF8791e-38162
NC_010805:2432167:2451495245149524534141920Burkholderia multivorans ATCC 17616 chromosome 2, completehypothetical protein4e-39162
NC_010086:20876:2184521845238091965Burkholderia multivorans ATCC 17616 chromosome 2, completetype VI secretion protein, VC_A0110 family4e-39162
NC_007952:1934249:1953214195321419551031890Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein2e-38161
NC_009802:114749:1400811400811417991719Campylobacter concisus 13826, complete genome2e-37157
NC_009256:1282793:1298941129894113007521812Burkholderia vietnamiensis G4 chromosome 1, complete sequencehypothetical protein6e-36152
NC_010551:1412139:1424959142495914267701812Burkholderia ambifaria MC40-6 chromosome 1, complete sequencetype VI secretion protein, VC_A0110 family1e-35151
NC_012724:2547500:2567758256775825696351878Burkholderia glumae BGR1 chromosome 1, complete genomehypothetical protein3e-35150
NC_020211:3398281:3404230340423034060711842Serratia marcescens WW4, complete genometype VI secretion protein, TssF family1e-34148
NC_011000:1397611:1404478140447814063551878Burkholderia cenocepacia J2315 chromosome 1, complete sequencehypothetical protein5e-34146
NC_010557:1030319:1045371104537110471821812Burkholderia ambifaria MC40-6 chromosome 3, complete sequencetype VI secretion protein, VC_A0110 family1e-32141
NC_008253:2965573:296747529674752967792318Escherichia coli 536, complete genomehypothetical protein3e-32140
NC_008390:1293823:1302205130220513040851881Burkholderia cepacia AMMD chromosome 1, complete sequenceprotein of unknown function DUF8795e-32139
NC_010465:3919572:3923154392315439249981845Yersinia pseudotuberculosis YPIII, complete genometype VI secretion protein, VC_A0110 family8e-32139
NC_008149:442168:4562304562304580741845Yersinia pestis Nepal516, complete genomehypothetical protein1e-31138
NC_010159:770172:7737467737467755901845Yersinia pestis Angola, complete genomehypothetical protein1e-31138
NC_004088:4073698:4079732407973240815761845Yersinia pestis KIM, complete genomehypothetical protein1e-31138
NC_005810:4183297:4186879418687941887231845Yersinia pestis biovar Microtus str. 91001, complete genomehypothetical protein1e-31138
NC_003143:524755:5370275370275388711845Yersinia pestis CO92, complete genomehypothetical protein1e-31138
NC_009381:3558018:3561600356160035634441845Yersinia pestis Pestoides F chromosome, complete genomehypothetical protein1e-31138
NC_014029:576459:5905215905215923651845Yersinia pestis Z176003 chromosome, complete genomehypothetical protein1e-31138
NC_017154:520400:5326725326725345161845Yersinia pestis D106004 chromosome, complete genomehypothetical protein1e-31138
NC_009708:3862044:3868078386807838699221845Yersinia pseudotuberculosis IP 31758 chromosome, complete genomehypothetical protein1e-31138
NC_006155:751235:7635267635267653701845Yersinia pseudotuberculosis IP 32953, complete genomehypothetical protein1e-31138
NC_010634:732016:7452867452867471301845Yersinia pseudotuberculosis PB1/+, complete genometype VI secretion protein1e-31138
NC_017265:3861259:3874510387451038763541845Yersinia pestis biovar Medievalis str. Harbin 35 chromosome,hypothetical protein1e-31138
NC_017168:561402:5649845649845668281845Yersinia pestis A1122 chromosome, complete genometype VI secretion protein1e-31138
NC_017160:520799:5348615348615367051845Yersinia pestis D182038 chromosome, complete genomehypothetical protein1e-31138
NC_008314:2744553:2744553274455327463281776Ralstonia eutropha H16 chromosome 2, complete sequencehypothetical protein5e-30133
NC_011002:703194:7336537336537355331881Burkholderia cenocepacia J2315 chromosome 3, complete sequencehypothetical protein3e-28127
NC_007952:495000:4953924953924973171926Burkholderia xenovorans LB400 chromosome 2, complete sequencehypothetical protein3e-26120
NC_013892:1457500:1465259146525914670161758Xenorhabdus bovienii SS-2004 chromosome, complete genomehypothetical protein7e-26119