Pre_GI: BLASTP Hits

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Query: NC_010501:3448389:3453021 Pseudomonas putida W619, complete genome

Start: 3453021, End: 3453491, Length: 471

Host Lineage: Pseudomonas putida; Pseudomonas; Pseudomonadaceae; Pseudomonadales; Proteobacteria; Bacteria

General Information: Pseudomonas putida is a common endophytic and rhizosphere bacterium. Pseudomonas putida W619 was isolated from the Black Cottonwood tree and is closely related to other endophytic and rhizosphere strains of Pseudomonas putida. Bacteria belonging to the Pseudomonas group are common inhabitants of soil and water and can also be found on the surfaces of plants and animals. Pseudomonas bacteria are found in nature in a biofilm or in planktonic form. Pseudomonas bacteria are renowned for their metabolic versatility as they can grow under a variety of growth conditions and do not need any organic growth factors. As they are metabolically versatile, and well characterized, it makes them great candidates for biocatalysis, bioremediation and other agricultural applications. Certain strains have been used in the production of bioplastics.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013446:2062862:207891520789152079376462Comamonas testosteroni CNB-2, complete genometranscriptional regulator, MarR family1e-40165
NC_015976:2023540:203457520345752035093519Sphingobium sp. SYK-6, complete genomehypothetical protein8e-1785.9
NC_017249:2109843:212935321293532129919567Bradyrhizobium japonicum USDA 6, complete genomehypothetical protein2e-1168.6
NC_002488:1430680:143836214383621438841480Xylella fastidiosa 9a5c, complete genometranscriptional regulator (MarR/EmrR family)3e-0960.8
NC_010084:2171881:217188121718812172369489Burkholderia multivorans ATCC 17616 chromosome 1, completeMarR family transcriptional regulator4e-0857.4
NC_010804:1334581:135240413524041352892489Burkholderia multivorans ATCC 17616 chromosome 1, completeputative transcriptional repressor4e-0857.4
NC_009937:3324793:332479333247933325464672Azorhizobium caulinodans ORS 571, complete genometranscriptional regulator4e-0753.9
NC_015976:814922:826943826943827590648Sphingobium sp. SYK-6, complete genomeMarR family transcriptional regulator3e-0650.8