Pre_GI: BLASTN Hits

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Query: NC_010498:4166903 Escherichia coli SMS-3-5, complete genome

Start: 4166903, End: 4193471, Length: 26569

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_011750:44905734490573451714226570Escherichia coli IAI39 chromosome, complete genome019360BLASTN svgBLASTP svg
NC_011751:43739614373961440053726577Escherichia coli UMN026 chromosome, complete genome018620BLASTN svgBLASTP svg
NC_002695:46789454678945470459925655Escherichia coli O157:H7 str. Sakai, complete genome013210BLASTN svgBLASTP svg
NC_002655:47479264747926477356525640Escherichia coli O157:H7 EDL933, complete genome013210BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome08322BLASTN svgBLASTP svg
NC_007384:40950164095016412229027275Shigella sonnei Ss046, complete genome03291BLASTN svgBLASTP svg
NC_007606:37551553755155377834323189Shigella dysenteriae Sd197, complete genome03251BLASTN svgBLASTP svg
NC_009648:4497749*4497749452411726369Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome0896BLASTN svgBLASTP svg
NC_014500:48837944883794490328419491Dickeya dadantii 3937 chromosome, complete genome0868BLASTN svgBLASTP svg
NC_012912:47377034737703476071123009Dickeya zeae Ech1591, complete genome0807BLASTN svgBLASTP svg
NC_020260:3931567*3931567395659925033Cronobacter sakazakii Sp291, complete genome6e-174618BLASTN svgBLASTP svg
NC_015968:4790239*4790239481349923261Enterobacter asburiae LF7a chromosome, complete genome1e-58236BLASTN svgBLASTP svg
NC_009052:50899635089963511024820286Shewanella baltica OS155, complete genome7e-35157BLASTN svgBLASTP svg
NC_010995:45251194525119455888733769Cellvibrio japonicus Ueda107, complete genome4e-24121BLASTN svgBLASTP svg
NC_008702:1514707*1514707153954024834Azoarcus sp. BH72, complete genome2e-22115BLASTN svgBLASTP svg
NC_010524:3094303*3094303311453120229Leptothrix cholodnii SP-6, complete genome4e-21111BLASTN svgBLASTP svg
NC_016027:34676834676836509918332Gluconacetobacter xylinus NBRC 3288, complete genome4e-21111BLASTN svgBLASTP svg
NC_006512:27890982789098281990130804Idiomarina loihiensis L2TR, complete genome4e-18101BLASTN svgBLASTP svg
NC_007481:3167434*3167434319295225519Pseudoalteromonas haloplanktis TAC125 chromosome I, complete1e-1799.6BLASTN svgBLASTP svg
NC_007005:60567656056765608605229288Pseudomonas syringae pv. syringae B728a, complete genome2e-1695.6BLASTN svgBLASTP svg
NC_009138:31535763153576318147527900Herminiimonas arsenicoxydans, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_007492:6372900*6372900643584362944Pseudomonas fluorescens PfO-1, complete genome3e-1591.7BLASTN svgBLASTP svg
NC_002695:45841774584177463575951583Escherichia coli O157:H7 str. Sakai, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_002655:46531604653160470328250123Escherichia coli O157:H7 EDL933, complete genome5e-1487.7BLASTN svgBLASTP svg
NC_014963:40919104091910411615324244Terriglobus saanensis SP1PR4 chromosome, complete genome5e-1177.8BLASTN svgBLASTP svg
AP010958:25040722504072253559331522Escherichia coli O103:H2 str. 12009 DNA, complete genome2e-1075.8BLASTN svgBLASTP svg
CP002185:22337322233732226508731356Escherichia coli W, complete genome2e-1075.8BLASTN svgBLASTP svg
CP002516:18464921846492187615129660Escherichia coli KO11, complete genome2e-1075.8BLASTN svgBLASTP svg
CU928145:23244952324495235493330439Escherichia coli 55989 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
CU928160:21559472155947218736531419Escherichia coli IAI1 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_004431:23839012383901241472630826Escherichia coli CFT073, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007613:86408486408489531131228Shigella boydii Sb227, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007946:22318722231872226061428743Escherichia coli UTI89, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_007946:25874725874728282624080Escherichia coli UTI89, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011751:23958822395882242503029149Escherichia coli UMN026 chromosome, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_011748:23244952324495235493330439Escherichia coli 55989, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_010658:10901041090104112159931496Shigella boydii CDC 3083-94, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_009801:22761312276131230753131401Escherichia coli E24377A, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008563:258725*25872528280524081Escherichia coli APEC O1, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_008253:21341102134110216406229953Escherichia coli 536, complete genome2e-1075.8BLASTN svgBLASTP svg
CP002185:47918114791811481779025980Escherichia coli W, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_002505:514732*51473255228437553Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete8e-1073.8BLASTN svgBLASTP svg
NC_007613:44030704403070442929526226Shigella boydii Sb227, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_007946:289425*28942536040270978Escherichia coli UTI89, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008253:25705925705928215125093Escherichia coli 536, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_008563:28713628713630584318708Escherichia coli APEC O1, complete genome8e-1073.8BLASTN svgBLASTP svg
NC_014218:253558*25355828008626529Arcanobacterium haemolyticum DSM 20595 chromosome, complete genome3e-0971.9BLASTN svgBLASTP svg
AC_000091:39952333995233402122325991Escherichia coli W3110 DNA, complete genome1e-0869.9BLASTN svgBLASTP svg
AP010958:86786986786989060722739Escherichia coli O103:H2 str. 12009 DNA, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_000913:3624826*3624826366560340778Escherichia coli K12, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_002695:20565452056545207693920395Escherichia coli O157:H7 str. Sakai, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007384:38970003897000391653419535Shigella sonnei Ss046, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_007613:29818292981829300438522557Shigella boydii Sb227, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_008258:1934479*1934479196306928591Shigella flexneri 5 str. 8401, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_010473:37225713722571375929536725Escherichia coli str. K-12 substr. DH10B, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_014323:50510415051041507664325603Herbaspirillum seropedicae SmR1 chromosome, complete genome1e-0869.9BLASTN svgBLASTP svg
NC_000913:43074714307471432826120791Escherichia coli K12, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_000913:20925592092559212109928541Escherichia coli K12, complete genome5e-0867.9BLASTN svgBLASTP svg
CP002516:44312354431235445210920875Escherichia coli KO11, complete genome5e-0867.9BLASTN svgBLASTP svg
AC_000091:43131674313167433668223516Escherichia coli W3110 DNA, complete genome5e-0867.9BLASTN svgBLASTP svg
AC_000091:20966722096672212665729986Escherichia coli W3110 DNA, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002655:51948045194804521379718994Escherichia coli O157:H7 EDL933, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_002695:51648195164819518468719869Escherichia coli O157:H7 str. Sakai, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_007384:16500*165004120424705Shigella sonnei Ss046, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_009801:11921*119213399422074Escherichia coli E24377A, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010468:3970995*3970995399406323069Escherichia coli ATCC 8739, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010473:21835672183567221209928533Escherichia coli str. K-12 substr. DH10B, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010473:44094924409492443038920898Escherichia coli str. K-12 substr. DH10B, complete genome5e-0867.9BLASTN svgBLASTP svg
NC_010468:40594364059436408235622921Escherichia coli ATCC 8739, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_014973:24300024300026234519346Geobacter sp. M18 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
NC_015733:5955467*5955467598799932533Pseudomonas putida S16 chromosome, complete genome2e-0765.9BLASTN svgBLASTP svg
AC_000091:4472000*4472000449474322744Escherichia coli W3110 DNA, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_000913:4462782*4462782448642323642Escherichia coli K12, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_002695:91750991750994039822890Escherichia coli O157:H7 str. Sakai, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_004741:20816492081649211300631358Shigella flexneri 2a str. 2457T, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007384:27881027881029760818799Shigella sonnei Ss046, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_007613:4217557*4217557425611838562Shigella boydii Sb227, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008258:21006462100646213188931244Shigella flexneri 5 str. 8401, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_008563:46560004656000467809922100Escherichia coli APEC O1, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_009720:43675844367584439276525182Xanthobacter autotrophicus Py2, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010473:4564590*4564590458823123642Escherichia coli str. K-12 substr. DH10B, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_010501:5735656*5735656577333937684Pseudomonas putida W619, complete genome8e-0763.9BLASTN svgBLASTP svg
NC_011751:25683025683028052023691Escherichia coli UMN026 chromosome, complete genome8e-0763.9BLASTN svgBLASTP svg
CU928160:43951564395156441536720212Escherichia coli IAI1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_000913:3256307*3256307327821621910Escherichia coli K12, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002655:28396002839600287010630507Escherichia coli O157:H7 EDL933, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_002695:27693872769387279989230506Escherichia coli O157:H7 str. Sakai, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_004431:48676484867648489054022893Escherichia coli CFT073, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007384:10860251086025111635930335Shigella sonnei Ss046, complete genome3e-0661.9BLASTN svgBLASTP svg
CU928160:3344746*3344746336309918354Escherichia coli IAI1 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
CU928145:3608917*3608917363276823852Escherichia coli 55989 chromosome, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002516:613462*61346263169018229Escherichia coli KO11, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002185:45661504566150459009923950Escherichia coli W, complete genome3e-0661.9BLASTN svgBLASTP svg
CP002185:3475991*3475991350005224062Escherichia coli W, complete genome3e-0661.9BLASTN svgBLASTP svg
AP010958:50221965022196504082118626Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg
AP010958:36695003669500372827458775Escherichia coli O103:H2 str. 12009 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg
AC_000091:3258377*3258377328148023104Escherichia coli W3110 DNA, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007384:1320287*1320287134781127525Shigella sonnei Ss046, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007384:45300004530000455031620317Shigella sonnei Ss046, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010658:3014371*3014371303259918229Shigella boydii CDC 3083-94, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010473:3354052*3354052337759923548Escherichia coli str. K-12 substr. DH10B, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010468:61381261381263388120070Escherichia coli ATCC 8739, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_010468:43051054305105432709121987Escherichia coli ATCC 8739, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009801:46430004643000466340420405Escherichia coli E24377A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009801:35950013595001361359918599Escherichia coli E24377A, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009800:43322294332229435609923871Escherichia coli HS, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_009800:3307123*3307123332547318351Escherichia coli HS, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008563:3888232*3888232390776619535Escherichia coli APEC O1, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_008253:45419154541915456410622192Escherichia coli 536, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007946:3855445*3855445387497119527Escherichia coli UTI89, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007613:41568414156841418149124651Shigella boydii Sb227, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007613:34703143470314350909338780Shigella boydii Sb227, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_011748:3608917*3608917363276823852Escherichia coli 55989, complete genome3e-0661.9BLASTN svgBLASTP svg