Pre_GI: BLASTN Hits

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Query: NC_010498:4031500 Escherichia coli SMS-3-5, complete genome

Start: 4031500, End: 4053111, Length: 21612

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
NC_013850:109500*10950013209922600Klebsiella variicola At-22 chromosome, complete genome01120BLASTN svgBLASTP svg
NC_013716:44082014408201443527827078Citrobacter rodentium ICC168, complete genome02898BLASTN svgBLASTP svg
NC_009792:46589094658909468286123953Citrobacter koseri ATCC BAA-895, complete genome04032BLASTN svgBLASTP svg
NC_008258:3995553*3995553402149425942Shigella flexneri 5 str. 8401, complete genome07473BLASTN svgBLASTP svg
NC_004741:3992384*3992384401736124978Shigella flexneri 2a str. 2457T, complete genome07559BLASTN svgBLASTP svg
AC_000091:3827856*3827856385515527300Escherichia coli W3110 DNA, complete genome07628BLASTN svgBLASTP svg
AP010958:4668181*4668181469259924419Escherichia coli O103:H2 str. 12009 DNA, complete genome08506BLASTN svgBLASTP svg
NC_011740:4007000*4007000403180124802Escherichia fergusonii ATCC 35469, complete genome011490BLASTN svgBLASTP svg
NC_004337:3590323*35903233952993362671Shigella flexneri 2a str. 301, complete genome012110BLASTN svgBLASTP svg
NC_006511:3690828*3690828371609925272Salmonella enterica subsp. enterica serovar Paratyphi A str. ATCC02133BLASTN svgBLASTP svg
NC_010067:38469623846962387119224231Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete02115BLASTN svgBLASTP svg
NC_010102:38515003851500387645224953Salmonella enterica subsp. enterica serovar Paratyphi B str. SPB7,02101BLASTN svgBLASTP svg
NC_020063:974369743612048123046Enterobacteriaceae bacterium strain FGI 57, complete genome01594BLASTN svgBLASTP svg
NC_006905:3845000*3845000386969524696Salmonella enterica subsp. enterica serovar Choleraesuis str02046BLASTN svgBLASTP svg
NC_003198:3924952*3924952395155226601Salmonella enterica subsp. enterica serovar Typhi str. CT18,02062BLASTN svgBLASTP svg
NC_004631:3910451*3910451393705126601Salmonella enterica subsp. enterica serovar Typhi Ty2, complete02062BLASTN svgBLASTP svg
NC_011149:3822000*3822000384676224763Salmonella enterica subsp. enterica serovar Agona str. SL483,02085BLASTN svgBLASTP svg
NC_003197:3902500*3902500392838425885Salmonella typhimurium LT2, complete genome02093BLASTN svgBLASTP svg
NC_011080:3875320*3875320390054525226Salmonella enterica subsp. enterica serovar Newport str. SL254,02093BLASTN svgBLASTP svg
NC_011083:3915500*3915500393961024111Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,02093BLASTN svgBLASTP svg
NC_004337:3761865*3761865378609924235Shigella flexneri 2a str. 301, complete genome012110BLASTN svgBLASTP svg
NC_000913:3786124*3786124381459928476Escherichia coli K12, complete genome012220BLASTN svgBLASTP svg
NC_010473:3883701*3883701391159927899Escherichia coli str. K-12 substr. DH10B, complete genome012220BLASTN svgBLASTP svg
CU928160:3862935*3862935388577322839Escherichia coli IAI1 chromosome, complete genome025750BLASTN svgBLASTP svg
NC_009801:4108179*4108179413170423526Escherichia coli E24377A, complete genome025750BLASTN svgBLASTP svg
CP002185:3998112*3998112402163723526Escherichia coli W, complete genome026040BLASTN svgBLASTP svg
CP002516:88500*8850011436625867Escherichia coli KO11, complete genome026040BLASTN svgBLASTP svg
NC_008563:40835584083558410710723550Escherichia coli APEC O1, complete genome026310BLASTN svgBLASTP svg
NC_007946:4050762*4050762407361822857Escherichia coli UTI89, complete genome026330BLASTN svgBLASTP svg
NC_004431:4223232*4223232424609922868Escherichia coli CFT073, complete genome026580BLASTN svgBLASTP svg
NC_008253:3896704*3896704392023823535Escherichia coli 536, complete genome026610BLASTN svgBLASTP svg
NC_011750:4307166*4307166433102623861Escherichia coli IAI39 chromosome, complete genome026710BLASTN svgBLASTP svg
NC_009800:3821824*3821824384534923526Escherichia coli HS, complete genome025730BLASTN svgBLASTP svg
NC_010468:80000*8000010593725938Escherichia coli ATCC 8739, complete genome025650BLASTN svgBLASTP svg
NC_007606:3784847*3784847380859923753Shigella dysenteriae Sd197, complete genome012360BLASTN svgBLASTP svg
NC_002655:4606000*4606000462939223393Escherichia coli O157:H7 EDL933, complete genome013030BLASTN svgBLASTP svg
CU928145:4167043*4167043419159624554Escherichia coli 55989 chromosome, complete genome013050BLASTN svgBLASTP svg
NC_002695:4537000*4537000455962722628Escherichia coli O157:H7 str. Sakai, complete genome013050BLASTN svgBLASTP svg
NC_011748:4167043*4167043419159624554Escherichia coli 55989, complete genome013050BLASTN svgBLASTP svg
NC_011751:4251296*4251296427504623751Escherichia coli UMN026 chromosome, complete genome013330BLASTN svgBLASTP svg
NC_007613:3637832*3637832366214824317Shigella boydii Sb227, complete genome025580BLASTN svgBLASTP svg
NC_010658:3774110*3774110379937225263Shigella boydii CDC 3083-94, complete genome025580BLASTN svgBLASTP svg
NC_007384:3956465*3956465398127224808Shigella sonnei Ss046, complete genome025630BLASTN svgBLASTP svg
NC_009648:4359875*4359875438125321379Klebsiella pneumoniae subsp. pneumoniae MGH 78578, complete genome1e-156561BLASTN svgBLASTP svg
NC_013421:4790696*4790696482022829533Pectobacterium wasabiae WPP163, complete genome1e-150541BLASTN svgBLASTP svg
NC_004547:164000*16400019143427435Erwinia carotovora subsp. atroseptica SCRI1043, complete genome1e-143517BLASTN svgBLASTP svg
NC_013961:73037*7303710749134455Erwinia amylovora, complete genome8e-136492BLASTN svgBLASTP svg
NC_013508:63914639148559921686Edwardsiella tarda EIB202, complete genome2e-62248BLASTN svgBLASTP svg
NC_002506:82240182240184494222542Vibrio cholerae O1 biovar eltor str. N16961 chromosome II, complete7e-47196BLASTN svgBLASTP svg
NC_004460:16188921618892163876819877Vibrio vulnificus CMCP6 chromosome II, complete sequence3e-43184BLASTN svgBLASTP svg
NC_005140:34000034000036232922330Vibrio vulnificus YJ016 chromosome II, complete sequence4e-36161BLASTN svgBLASTP svg
NC_009784:25385225385227160217751Vibrio harveyi ATCC BAA-1116 chromosome II, complete sequence9e-34153BLASTN svgBLASTP svg
NC_008321:46318664631866465846026595Shewanella sp. MR-4, complete genome9e-34153BLASTN svgBLASTP svg
NC_010694:63654*636548609922446Erwinia tasmaniensis, complete genome5e-29137BLASTN svgBLASTP svg
NC_007712:38060003806000383079624797Sodalis glossinidius str. 'morsitans', complete genome2e-25125BLASTN svgBLASTP svg
NC_008577:49074974907497493408326587Shewanella sp. ANA-3 chromosome 1, complete sequence8e-25123BLASTN svgBLASTP svg
NC_012913:2189862*2189862221535925498Aggregatibacter aphrophilus NJ8700, complete genome1e-23119BLASTN svgBLASTP svg
NC_011186:515214*51521454656031347Vibrio fischeri MJ11 chromosome II, complete sequence2e-1695.6BLASTN svgBLASTP svg
NC_013416:386301*38630140838122081Aggregatibacter actinomycetemcomitans D11S-1, complete genome4e-1487.7BLASTN svgBLASTP svg
NC_003295:26694802669480269721727738Ralstonia solanacearum GMI1000, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014923:5787493*5787493583009942607Mesorhizobium ciceri biovar biserrulae WSM1271 chromosome, complete1e-1179.8BLASTN svgBLASTP svg
NC_015633:41358741358744184328257Vibrio anguillarum 775 chromosome chromosome I, complete sequence7e-1073.8BLASTN svgBLASTP svg
NC_012968:381771*38177140409922329Methylotenera mobilis JLW8, complete genome7e-1073.8BLASTN svgBLASTP svg
NC_008700:367949*36794939264724699Shewanella amazonensis SB2B, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_007947:290864*29086430939718534Methylobacillus flagellatus KT, complete genome3e-0971.9BLASTN svgBLASTP svg
NC_002505:23856923856927414635578Vibrio cholerae O1 biovar eltor str. N16961 chromosome I, complete3e-0971.9BLASTN svgBLASTP svg
NC_014734:353159*35315937609922941Paludibacter propionicigenes WB4 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_009783:64950064950066965220153Vibrio harveyi ATCC BAA-1116 chromosome I, complete sequence6e-0763.9BLASTN svgBLASTP svg
NC_009654:4253431*4253431427667923249Marinomonas sp. MWYL1, complete genome6e-0763.9BLASTN svgBLASTP svg
NC_009439:63719363719366076223570Pseudomonas mendocina ymp, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_007912:4661141*4661141468409922959Saccharophagus degradans 2-40, complete genome3e-0661.9BLASTN svgBLASTP svg
NC_005125:34202703420270344513224863Gloeobacter violaceus PCC 7421, complete genome3e-0661.9BLASTN svgBLASTP svg