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Query: NC_010498:1615980 Escherichia coli SMS-3-5, complete genome

Start: 1615980, End: 1637167, Length: 21188

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

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Islands with an asterisk (*) contain ribosomal proteins or RNA related elements and may indicate a False Positive Prediction!

Subject IslandStartEndLengthSubject Host DescriptionE-valueBit scoreVisual BLASTNVisual BLASTP
CP002516:23616282361628238443522808Escherichia coli KO11, complete genome025660BLASTN svgBLASTP svg
CP002185:17274931727493175122423732Escherichia coli W, complete genome025660BLASTN svgBLASTP svg
CU928160:16255351625535164926623732Escherichia coli IAI1 chromosome, complete genome025640BLASTN svgBLASTP svg
NC_009800:16325851632585165133118747Escherichia coli HS, complete genome025570BLASTN svgBLASTP svg
NC_008563:16512701651270167412522856Escherichia coli APEC O1, complete genome024130BLASTN svgBLASTP svg
NC_010473:1712984*1712984174109928116Escherichia coli str. K-12 substr. DH10B, complete genome03586BLASTN svgBLASTP svg
AC_000091:16270491627049165562928581Escherichia coli W3110 DNA, complete genome03586BLASTN svgBLASTP svg
NC_010067:14140001414000143680422805Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, complete0680BLASTN svgBLASTP svg
NC_009792:14797791479779150315123373Citrobacter koseri ATCC BAA-895, complete genome8e-102379BLASTN svgBLASTP svg
NC_009778:17174581717458175914341686Enterobacter sakazakii ATCC BAA-894, complete genome3e-46194BLASTN svgBLASTP svg
NC_013850:28460692846069288409738029Klebsiella variicola At-22 chromosome, complete genome1e-23119BLASTN svgBLASTP svg
NC_012779:261438*26143828632424887Edwardsiella ictaluri 93-146, complete genome3e-1281.8BLASTN svgBLASTP svg
NC_014562:469154*46915449304023887Pantoea vagans C9-1 chromosome, complete genome1e-1179.8BLASTN svgBLASTP svg
NC_013508:275081*27508130064325563Edwardsiella tarda EIB202, complete genome4e-1177.8BLASTN svgBLASTP svg
NC_020291:15931431593143161363220490Clostridium saccharoperbutylacetonicum N1-4(HMT), complete genome4e-1177.8BLASTN svgBLASTP svg
NC_012214:20190002019000204685227853Erwinia pyrifoliae Ep1/96, complete genome2e-1075.8BLASTN svgBLASTP svg
NC_016023:72984372984374912819286Bacillus coagulans 36D1 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_015634:52688952688954615519267Bacillus coagulans 2-6 chromosome, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_008525:108687*10868714459935913Pediococcus pentosaceus ATCC 25745, complete genome4e-0867.9BLASTN svgBLASTP svg
NC_006155:3779381*3779381380559426214Yersinia pseudotuberculosis IP 32953, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010465:933488*93348895909925612Yersinia pseudotuberculosis YPIII, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_010634:3692321*3692321371595823638Yersinia pseudotuberculosis PB1/+, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_013517:10140001014000103410520106Sebaldella termitidis ATCC 33386, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_016047:41089104108910414292834019Bacillus subtilis subsp. spizizenii TU-B-10 chromosome, complete2e-0661.9BLASTN svgBLASTP svg
NC_019978:7535*75353211824584Halobacteroides halobius DSM 5150, complete genome2e-0661.9BLASTN svgBLASTP svg
NC_008528:33126033126035463323374Oenococcus oeni PSU-1, complete genome1e-0560BLASTN svgBLASTP svg