Pre_GI: BLASTP Hits

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Query: NC_010498:4856011:4876033 Escherichia coli SMS-3-5, complete genome

Start: 4876033, End: 4876266, Length: 234

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:3405520:341461934146193414852234Escherichia coli ED1a chromosome, complete genomehypothetical protein4e-40162
NC_008253:3941938:397542639754263975659234Escherichia coli 536, complete genomeputative regulatory protein4e-40162
NC_004431:4319152:432964443296444329877234Escherichia coli CFT073, complete genomehypothetical protein4e-40162
NC_011750:4390000:439414243941424394378237Escherichia coli IAI39 chromosome, complete genomeputative phage regulatory protein8e-38155
CU928145:4950723:496570849657084965944237Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative phage regulatory protein2e-37154
NC_011748:4950723:496570849657084965944237Escherichia coli 55989, complete genomeconserved hypothetical protein; putative phage regulatory protein2e-37154
NC_002655:1103991:111339711133971113594198Escherichia coli O157:H7 EDL933, complete genomehypothetical protein1e-30131
NC_002695:1417912:142523114252311425428198Escherichia coli O157:H7 str. Sakai, complete genomehypothetical protein1e-30131
NC_013008:1354988:136910313691031369300198Escherichia coli O157:H7 str. TW14359 chromosome, complete genomehypothetical protein1e-30131
NC_013361:1335166:134566313456631345860198Escherichia coli O26:H11 str. 11368 chromosome, complete genomeregulatory protein1e-30131
NC_013364:1306756:131724813172481317445198Escherichia coli O111:H- str. 11128, complete genomeputative DNA binding protein1e-30131
NC_011750:4775770:478416447841644784337174Escherichia coli IAI39 chromosome, complete genomehypothetical protein5e-28122
NC_011083:4547825:458032145803214580494174Salmonella enterica subsp. enterica serovar Heidelberg str. SL476,transcriptional regulator, AlpA family5e-28122
NC_015663:1869000:187989218798921880185294Enterobacter aerogenes KCTC 2190 chromosome, complete genomeputative phage regulatory protein7e-23105
NC_020418:116500:137273137273137482210Morganella morganii subsp. morganii KT, complete genomeputative regulatory protein8e-2199
NC_009708:915814:921909921909922118210Yersinia pseudotuberculosis IP 31758 chromosome, complete genomeAlpA family protein2e-2097.8
NC_016612:2009927:204035620403562040562207Klebsiella oxytoca KCTC 1686 chromosome, complete genomeputative regulatory protein2e-2097.8
NC_011415:308825:315998315998316264267Escherichia coli SE11 chromosome, complete genomehypothetical protein3e-2097.4
NC_010465:3431500:343247334324733432679207Yersinia pseudotuberculosis YPIII, complete genomephage transcriptional regulator, AlpA3e-2097.1
NC_015663:1:270812708127320240Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-2096.7
NC_012917:3241196:325885132588513259057207Pectobacterium carotovorum subsp. carotovorum PC1, complete genomephage transcriptional regulator, AlpA5e-2096.3
NC_016902:4236680:424263542426354242853219Escherichia coli KO11FL chromosome, complete genomephage transcriptional regulator, AlpA5e-2096.3
CP002516:4236680:424263542426354242853219Escherichia coli KO11, complete genomephage transcriptional regulator, AlpA5e-2096.3
CP002185:4750571:477001647700164770234219Escherichia coli W, complete genomepredicted AlpA-like transcriptional regulator5e-2096.3
NC_004431:279868:282559282559282765207Escherichia coli CFT073, complete genomehypothetical protein6e-2095.9
NC_011751:3453683:350983635098363510096261Escherichia coli UMN026 chromosome, complete genome7e-2095.9
NC_008253:3161311:316248631624863162692207Escherichia coli 536, complete genomeputative regulatory protein8e-2095.9
NC_013716:5201097:523170852317085231914207Citrobacter rodentium ICC168, complete genomepuative transcriptional regulator8e-2095.5
NC_004431:3409389:348674734867473487007261Escherichia coli CFT073, complete genomehypothetical protein8e-2095.5
NC_013941:3676146:370774337077433707949207Escherichia coli O55:H7 str. CB9615 chromosome, complete genometranscriptional regulator1e-1995.1
NC_013353:3627355:365955836595583659764207Escherichia coli O103:H2 str. 12009, complete genometranscriptional regulator1e-1995.1
AP010958:3627355:365955836595583659764207Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted transcriptional regulator1e-1995.1
NC_004431:279868:288649288649288786138Escherichia coli CFT073, complete genomehypothetical protein1e-1995.1
NC_017328:3088907:312241231224123122618207Shigella flexneri 2002017 chromosome, complete genomeRegulator of excision1e-1994.7
NC_004337:3049118:308270830827083082914207Shigella flexneri 2a str. 301, complete genomehypothetical protein1e-1994.7
NC_004741:3041294:307353830735383073744207Shigella flexneri 2a str. 2457T, complete genomehypothetical protein1e-1994.7
NC_015663:549425:570501570501570707207Enterobacter aerogenes KCTC 2190 chromosome, complete genomephage transcriptional regulator AlpA4e-1993.6
NC_014618:4114004:413381341338134134079267Enterobacter cloacae SCF1 chromosome, complete genomephage transcriptional regulator AlpA1e-1891.7
NC_013353:5272863:528282052828205283026207Escherichia coli O103:H2 str. 12009, complete genomeDNA binding protein2e-1891.3
AP010958:5272863:528282052828205283026207Escherichia coli O103:H2 str. 12009 DNA, complete genomeprobable DNA binding protein2e-1891.3
NC_013592:446092:462842462842463054213Dickeya dadantii Ech586, complete genomephage transcriptional regulator, AlpA3e-1890.5
NC_013421:1505176:150927615092761509488213Pectobacterium wasabiae WPP163, complete genomephage transcriptional regulator, AlpA2e-1787.8
NC_011740:2859933:286231628623162862525210Escherichia fergusonii ATCC 35469, complete genomeputative regulatory protein3e-1787
CP002516:44744:552865528655489204Escherichia coli KO11, complete genomephage transcriptional regulator, AlpA3e-1683.6
CP002185:4035502:405058440505844050787204Escherichia coli W, complete genomehypothetical protein3e-1683.6
NC_016902:44744:552865528655489204Escherichia coli KO11FL chromosome, complete genomephage transcriptional regulator, AlpA3e-1683.6
NC_013961:441719:463698463698463895198Erwinia amylovora, complete genomeUncharacterized protein ORF883e-1683.6
NC_013971:3296272:330740533074053307602198Erwinia amylovora ATCC 49946 chromosome, complete genomephage-regulatory protein3e-1683.6
NC_013971:3117000:313278731327873133716930Erwinia amylovora ATCC 49946 chromosome, complete genomeATPase5e-1476.3
NC_015663:1356982:137202113720211372422402Enterobacter aerogenes KCTC 2190 chromosome, complete genometranscriptional regulator, AlpA family protein8e-1475.9
NC_020260:882307:901042901042901233192Cronobacter sakazakii Sp291, complete genomeputative IS3 family transposase orfB5e-1166.6
NC_014121:3776902:378543237854323785623192Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative IS3 family transposase orfB5e-1166.6
NC_011745:3245000:326245132624513262654204Escherichia coli ED1a chromosome, complete genomeputative regulatory protein from prophage (AlpA family)4e-0960.1
NC_010694:2716348:273867627386762738873198Erwinia tasmaniensis, complete genomePutative hypothetical protein (prophage CP4-57 regulatory protein)7e-0959.3
NC_013892:3278647:328257832825783282784207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage1e-0858.5
NC_011741:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein2e-0857.8
CU928160:4570498:458052645805264580732207Escherichia coli IAI1 chromosome, complete genomeputative phage DNA binding protein2e-0857.8
NC_009436:3117661:314615831461583146364207Enterobacter sp. 638, complete genomephage transcriptional regulator, AlpA3e-0857
NC_009662:1329788:133831513383151338509195Nitratiruptor sp. SB155-2, complete genometranscriptional regulator3e-0857
NC_013892:1272448:129876412987641298970207Xenorhabdus bovienii SS-2004 chromosome, complete genomeCP4-57 prophage; transcriptional acitvator of a P4-like cryptic prophage4e-0857
NC_010067:191190:199577199577199783207Salmonella enterica subsp. arizonae serovar 62:z4,z23:--, completehypothetical protein9e-0855.5
NC_011094:638552:652744652744652941198Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein3e-0753.9
NC_011283:4438500:445473644547364454942207Klebsiella pneumoniae 342 chromosome, complete genometranscriptional regulator AlpA family4e-0753.5
NC_008322:2077628:209572820957282095949222Shewanella sp. MR-7, complete genomephage transcriptional regulator, AlpA7e-0752.4
NC_011094:2791719:281336128133612813570210Salmonella enterica subsp. enterica serovar Schwarzengrund strhypothetical protein2e-0651.2
NC_018691:3525430:356425235642523564566315Alcanivorax dieselolei B5 chromosome, complete genomePhage transcriptional regulator, AlpA3e-0650.4
NC_013008:3525428:355770135577013557907207Escherichia coli O157:H7 str. TW14359 chromosome, complete genomeDNA binding protein3e-0650.4
NC_002695:3468873:349874034987403498946207Escherichia coli O157:H7 str. Sakai, complete genomeputative DNA binding protein3e-0650.4
NC_002655:3538656:356603035660303566236207Escherichia coli O157:H7 EDL933, complete genomeputative DNA binding protein3e-0650.4
NC_015379:908904:935089935089935310222Pseudomonas brassicacearum subsp. brassicacearum NFM421 chromosome,Putative transcription factor, AlpA family4e-0650.4
NC_011745:2209288:226533522653352265553219Escherichia coli ED1a chromosome, complete genomeputative DNA binding protein from phage origin4e-0650.1
NC_009901:1516340:153082715308271531030204Shewanella pealeana ATCC 700345, complete genomephage transcriptional regulator, AlpA4e-0650.1