Pre_GI: BLASTP Hits

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Query: NC_010498:4856011:4871104 Escherichia coli SMS-3-5, complete genome

Start: 4871104, End: 4871403, Length: 300

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_010660:86445:911009110091342243Shigella boydii CDC 3083-94 plasmid pBS512_211, complete sequence3e-35147
NC_007607:87000:120388120388120630243Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceIS1353 transposase5e-31132
NC_014500:1862000:1898820189882019003551536Dickeya dadantii 3937 chromosome, complete genometransposase, IS3 family7e-30129
NC_014842:19411:2227522275238071533Pantoea sp. At-9b plasmid pPAT9B05, complete sequenceIntegrase catalytic region1e-29128
CP002797:4603787:461979546197954620019225Escherichia coli NA114, complete genomePutative transposase3e-27120
NC_020260:882307:903547903547904272726Cronobacter sakazakii Sp291, complete genomehypothetical protein2e-26117
NC_014121:3776902:378244637824463783171726Enterobacter cloacae subsp. cloacae ATCC 13047 chromosome, completeputative integrase3e-25114
NC_014839:12519:1559215592171241533Pantoea sp. At-9b plasmid pPAT9B02, complete sequenceIntegrase catalytic region6e-25112
NC_008782:3167440:3218129321812932196671539Acidovorax sp. JS42, complete genomeIntegrase, catalytic region6e-2199.4
NC_015381:2405446:2413309241330924148471539Burkholderia gladioli BSR3 chromosome 1, complete sequenceputative transposase1e-2098.6
NC_015383:229036:2359922359922370321041Burkholderia gladioli BSR3 plasmid bgla_4p, complete sequenceintegrase, catalytic region1e-2098.2
NC_007948:360199:3601993601993617461548Polaromonas sp. JS666, complete genomeIntegrase, catalytic region1e-2098.2
NC_007973:3240866:3247826324782632493641539Ralstonia metallidurans CH34 chromosome 1, complete sequenceIntegrase, catalytic region3e-2097.1
NC_010002:2933909:2940968294096829425061539Delftia acidovorans SPH-1, complete genomeIntegrase catalytic region3e-2097.1
NC_013446:1648556:1684363168436316859011539Comamonas testosteroni CNB-2, complete genomeIntegrase, catalytic region3e-2097.1
NC_013446:2820000:284026328402632841003741Comamonas testosteroni CNB-2, complete genomeIntegrase, catalytic region9e-2095.5
NC_016860:4055117:4080318408031840818621545Salmonella enterica subsp. enterica serovar Typhimurium strInsG2e-1994.7
NC_009140:121107:1383811383811399251545Salmonella enterica enterica sv Newport str. SL254, completetransposase InsG for insertion sequence IS13532e-1994.7
NC_015152:2528399:2546312254631225478741563Spirochaeta sp. Buddy chromosome, complete genome2e-1994
NC_016633:2688144:2692249269224926938051557Sphaerochaeta pleomorpha str. Grapes chromosome, complete genometransposase4e-1993.2
NC_016633:2688144:2688144268814426897001557Sphaerochaeta pleomorpha str. Grapes chromosome, complete genometransposase4e-1993.2
NC_008789:1393526:1413395141339514149271533Halorhodospira halophila SL1, complete genomeIntegrase, catalytic region6e-1992.8
NC_008340:1733735:1746503174650317480201518Alkalilimnicola ehrlichei MLHE-1, complete genomeIntegrase, catalytic region3e-1890.5
NC_008340:1733735:1742504174250417440211518Alkalilimnicola ehrlichei MLHE-1, complete genomeIntegrase, catalytic region3e-1890.5
NC_015563:1951368:1986783198678319883211539Delftia sp. Cs1-4 chromosome, complete genomeintegrase catalytic subunit2e-1787.8
NC_017068:1480148:1489201148920114902561056Selenomonas ruminantium subsp. lactilytica TAM6421, completeputative transposase2e-1787.4
NC_008526:1973500:1982346198234619839951650Lactobacillus casei ATCC 334, complete genomeTransposase2e-1787.4
NC_010801:550270:5667645667645679781215Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu11 transposase5e-1786.7
NC_009254:74000:8357483574851121539Burkholderia vietnamiensis G4 chromosome 3, complete sequenceintegrase catalytic subunit5e-1786.7
NC_010087:460591:4653284653284668661539Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region5e-1786.3
NC_010087:319063:3568803568803584181539Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region5e-1786.3
NC_010508:1206498:1215312121531212168501539Burkholderia cenocepacia MC0-3 chromosome 1, complete sequenceIntegrase catalytic region1e-1685.1
NC_010515:1375091:1413849141384914153871539Burkholderia cenocepacia MC0-3 chromosome 2, complete sequenceIntegrase catalytic region4e-1683.2
NC_015136:1101725:1107959110795911094971539Burkholderia sp. CCGE1001 chromosome 1, complete sequenceintegrase catalytic subunit5e-1682.8
NC_017218:867550:877725877725878435711Bifidobacterium breve ACS-071-V-Sch8b chromosome, complete genome4e-1580.1
NC_015737:2691246:2704589270458927056351047Clostridium sp. SY8519, complete genomehypothetical protein6e-1476.3
NC_015737:2691246:2764400276440027654461047Clostridium sp. SY8519, complete genomehypothetical protein6e-1476.3
NC_015737:1441086:1446438144643814478201383Clostridium sp. SY8519, complete genomehypothetical protein5e-1476.3
NC_015152:2549756:2551426255142625529911566Spirochaeta sp. Buddy chromosome, complete genome1e-1375.1
NC_010545:1729161:1741335174133517424411107Corynebacterium urealyticum DSM 7109, complete genometransposase for insertion sequence1e-1374.7
NC_010545:619346:6250626250626261681107Corynebacterium urealyticum DSM 7109, complete genometransposase for insertion sequence1e-1374.7
NC_002935:1378566:1382700138270013840791380Corynebacterium diphtheriae NCTC 13129, complete genomePutative transposase3e-1270.9
NC_002935:1237585:1273380127338012747591380Corynebacterium diphtheriae NCTC 13129, complete genomePutative transposase2e-1270.9
NC_016788:1214026:1246640124664012480191380Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein2e-1270.9
NC_016788:655175:6584896584896598681380Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein2e-1270.9
NC_016799:198091:2304592304592318381380Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein2e-1270.9
NC_016799:731849:7376387376387390171380Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein2e-1270.9
NC_016800:694750:6947506947506961291380Corynebacterium diphtheriae BH8 chromosome, complete genometransposase-like protein2e-1270.9
NC_016790:1319060:1326261132626113274871227Corynebacterium diphtheriae VA01 chromosome, complete genometransposase-like protein2e-1270.9
NC_016800:1243000:1275708127570812769341227Corynebacterium diphtheriae BH8 chromosome, complete genometransposase-like protein2e-1270.9
NC_016799:731849:7519187519187531471230Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein2e-1270.9
NC_016799:1268706:1302764130276413038161053Corynebacterium diphtheriae 31A chromosome, complete genometransposase-like protein3e-1270.5
NC_016789:1805503:1820727182072718217791053Corynebacterium diphtheriae PW8 chromosome, complete genometransposase-like protein3e-1270.5
NC_016786:1079000:109504310950431095855813Corynebacterium diphtheriae HC01 chromosome, complete genometransposase-like protein4e-1270.1
NC_011751:1714131:172976817297681730490723Escherichia coli UMN026 chromosome, complete genometransposase ORF B, IS3 family, IS150 group2e-1167.8
NC_011750:2928990:296017829601782960900723Escherichia coli IAI39 chromosome, complete genometransposase ORF B, IS3 family, IS150 group2e-1167.8
NC_016786:1359064:139668613966861397534849Corynebacterium diphtheriae HC01 chromosome, complete genometransposase-like protein3e-1167
NC_016782:1385800:139671613967161397564849Corynebacterium diphtheriae 241 chromosome, complete genometransposase-like protein3e-1167
NC_012962:4591295:460932746093274610100774Photorhabdus asymbiotica, complete genomeputative transposase for insertion sequence element is1501e-1065.5
NC_012962:1661683:169454216945421695315774Photorhabdus asymbiotica, complete genomeyada protein1e-1065.5
NC_011593:533884:5682865682865696411356Bifidobacterium longum subsp. infantis ATCC 15697 chromosome,Integrase, catalytic region5e-1063.2
NC_017219:538864:5680795680795694341356Bifidobacterium longum subsp. infantis ATCC 15697, complete genomeputative transposase5e-1063.2
NC_008618:1729739:1730912173091217321801269Bifidobacterium adolescentis ATCC 15703, complete genomeIS3 family transposase8e-1062.4
NC_013721:533048:552238552238552972735Gardnerella vaginalis 409-05, complete genomeputative transposase InsK for insertion sequence IS1501e-0961.6
NC_012471:719000:735868735868736671804Streptococcus equi subsp. equi 4047, complete genometransposase2e-0961.2
NC_012471:1197534:120547912054791206282804Streptococcus equi subsp. equi 4047, complete genometransposase2e-0961.2
NC_011134:1360122:138372513837251384528804Streptococcus equi subsp. zooepidemicus str. MGCS10565, completetransposase IS861 orfB2e-0961.2
NC_011134:311360:315261315261316064804Streptococcus equi subsp. zooepidemicus str. MGCS10565, completetransposase IS861 orfB2e-0961.2
NC_012471:1752483:176751317675131768316804Streptococcus equi subsp. equi 4047, complete genometransposase2e-0961.2
NC_012471:781063:786747786747787550804Streptococcus equi subsp. equi 4047, complete genometransposase2e-0961.2
NC_014616:54500:7150771507731621656Bifidobacterium bifidum S17 chromosome, complete genometransposase4e-0960.1
NC_007296:1073784:107433810743381075144807Streptococcus pyogenes MGAS6180, complete genometransposase5e-0960.1
NC_004337:3590323:369176736917673692618852Shigella flexneri 2a str. 301, complete genomeIS150 ORF25e-0959.7
NC_008258:3581583:359885135988513599702852Shigella flexneri 5 str. 8401, complete genomeIS150 ORF25e-0959.7
NC_009790:42112:6383063830649801151Escherichia coli E24377A plasmid pETEC_74, complete sequence1e-0858.5
NC_016801:1255611:129268412926841293592909Corynebacterium diphtheriae C7 (beta) chromosome, complete genometransposase-like protein1e-0858.5
NC_012470:853561:872834872834873637804Streptococcus equi subsp. zooepidemicus, complete genometransposase1e-0858.5
NC_012471:2058592:206229620622962063162867Streptococcus equi subsp. equi 4047, complete genometransposase1e-0858.2
NC_014718:102852:107492107492108421930Burkholderia rhizoxinica HKI 454 chromosome, complete genomeTransposase4e-0857
NC_007974:1007834:101932110193211019800480Ralstonia metallidurans CH34 chromosome 2, complete sequence6e-0856.2
NC_010524:4644587:465005346500534650940888Leptothrix cholodnii SP-6, complete genomeIntegrase catalytic region8e-0855.8
NC_010524:824145:841562841562842449888Leptothrix cholodnii SP-6, complete genomeIntegrase catalytic region8e-0855.8
NC_010524:2117347:212619721261972127084888Leptothrix cholodnii SP-6, complete genomeIntegrase catalytic region8e-0855.8
NC_008150:1147883:115287811528781153663786Yersinia pestis Antiqua, complete genometransposase for insertion sequence IS16611e-0755.5
NC_017513:997716:100258210025821003331750Neisseria meningitidis G2136 chromosome, complete genometransposase1e-0755.1
NC_017505:1013311:103185910318591032608750Neisseria meningitidis alpha710 chromosome, complete genometransposase ISNg11e-0755.1
NC_014448:225414:243626243626244519894Mycoplasma hyorhinis HUB-1 chromosome, complete genometransposase InsK1e-0755.1
NC_016786:2017267:203289220328922033704813Corynebacterium diphtheriae HC01 chromosome, complete genometransposase-like protein2e-0754.7
NC_014500:2688095:270070827007082701493786Dickeya dadantii 3937 chromosome, complete genomeISEch2 OrfB2e-0754.7
NC_013716:1756545:176712417671241767573450Citrobacter rodentium ICC168, complete genome2e-0754.3
NC_007951:4741620:476224347622434762836594Burkholderia xenovorans LB400 chromosome 1, complete sequence3e-0754.3
NC_010801:629347:647663647663648499837Burkholderia multivorans ATCC 17616 chromosome 3, completeISBmu6b transposase3e-0753.9
NC_010087:265625:276358276358277194837Burkholderia multivorans ATCC 17616 chromosome 3, completeIntegrase catalytic region3e-0753.9
NC_009524:1796000:180854418085441809302759Psychrobacter sp. PRwf-1 chromosome, complete genomeintegrase catalytic subunit3e-0753.9
NC_010086:871723:878473878473879219747Burkholderia multivorans ATCC 17616 chromosome 2, completeIntegrase catalytic region4e-0753.5
NC_010805:1576735:159608515960851596831747Burkholderia multivorans ATCC 17616 chromosome 2, completeISBmu5a transposase4e-0753.5
NC_002935:1534889:154764015476401548452813Corynebacterium diphtheriae NCTC 13129, complete genomePutative transposase5e-0753.1
NC_002935:1534889:154059815405981541410813Corynebacterium diphtheriae NCTC 13129, complete genomePutative transposase5e-0753.1
NC_009788:16360:365973659737115519Escherichia coli E24377A plasmid pETEC_73, complete sequence6e-0752.8
NC_014448:414784:436055436055436504450Mycoplasma hyorhinis HUB-1 chromosome, complete genometransposase InsK8e-0752.4
NC_007005:3199820:322485632248563225662807Pseudomonas syringae pv. syringae B728a, complete genomeIntegrase, catalytic region9e-0752.4
NC_014448:225414:2289832289832304491467Mycoplasma hyorhinis HUB-1 chromosome, complete genometransposase, IS8612e-0651.2
NC_016077:8545:117851178512672888Acidaminococcus intestini RyC-MR95 chromosome, complete genomeputative transposase2e-0650.8
NC_016077:998741:103006910300691030956888Acidaminococcus intestini RyC-MR95 chromosome, complete genomeputative transposase2e-0650.8
NC_004369:1525787:153557415355741536428855Corynebacterium efficiens YS-314, complete genomeputative transposase7e-0649.3
NC_016802:2035723:205047320504732051285813Corynebacterium diphtheriae HC02 chromosome, complete genometransposase-like protein8e-0649.3
NC_016788:655175:675854675854676675822Corynebacterium diphtheriae HC04 chromosome, complete genometransposase-like protein8e-0649.3
NC_016786:2017267:203204420320442032838795Corynebacterium diphtheriae HC01 chromosome, complete genometransposase-like protein9e-0648.9
NC_014724:439594:4784814784814798811401Lactobacillus amylovorus GRL 1112 chromosome, complete genometransposase1e-0548.9