Pre_GI: BLASTP Hits

Some Help

Query: NC_010498:4856011:4856525 Escherichia coli SMS-3-5, complete genome

Start: 4856525, End: 4856737, Length: 213

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia



SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008258:1750964:1765649176564917692093561Shigella flexneri 5 str. 8401, complete genome3e-36150
NC_004741:2169877:2184286218428621901225837Shigella flexneri 2a str. 2457T, complete genome2e-34144
NC_008258:1750964:1760732176073217631942463Shigella flexneri 5 str. 8401, complete genome6e-34142
NC_007606:1515403:1526379152637915274011023Shigella dysenteriae Sd197, complete genomehypothetical protein7e-34142
NC_004431:4270305:428387242838724284084213Escherichia coli CFT073, complete genomehypothetical protein3e-31133
NC_007607:87000:104009104009104221213Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequenceputative iso-IS1 orf3e-23107
NC_010488:48868:566155661556827213Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequenceIS1 transposase orfA2e-22104
NC_010488:48868:651626516265374213Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequenceIS1 transposase orfA5e-22102
NC_010498:1035406:105072010507201050932213Escherichia coli SMS-3-5, complete genomeIS1 transposase orfA5e-22102
NC_007946:1280508:129322912932291293441213Escherichia coli UTI89, complete genomehypothetical protein5e-22102
NC_010488:48868:518765187652088213Escherichia coli SMS-3-5 plasmid pSMS35_130, complete sequenceIS1 transposase orfA6e-22102