Pre_GI: BLASTP Hits

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Query: NC_010498:3988351:4007027 Escherichia coli SMS-3-5, complete genome

Start: 4007027, End: 4007491, Length: 465

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013353:4707712:471199247119924712354363Escherichia coli O103:H2 str. 12009, complete genomeinner membrane protein1e-65248
NC_009800:3787320:379791237979123798274363Escherichia coli HS, complete genomehypothetical protein1e-65248
AP010958:4707712:471199247119924712354363Escherichia coli O103:H2 str. 12009 DNA, complete genomepredicted inner membrane protein1e-65248
NC_012759:3648500:365773136577313658093363Escherichia coli BW2952 chromosome, complete genomeputative inner membrane protein1e-65248
NC_012947:126596:138000138000138362363Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein1e-65248
NC_012967:3696877:370607537060753706437363Escherichia coli B str. REL606 chromosome, complete genomeputative inner membrane protein1e-65248
CP002185:3964500:397437239743723974734363Escherichia coli W, complete genomepredicted inner membrane protein2e-65247
CU928145:4131924:414327241432724143634363Escherichia coli 55989 chromosome, complete genomeconserved hypothetical protein; putative inner membrane protein2e-65247
CP002516:119935:131339131339131701363Escherichia coli KO11, complete genomehypothetical protein2e-65247
NC_009801:4073968:408454440845444084906363Escherichia coli E24377A, complete genomehypothetical protein2e-65247
NC_011748:4131924:414327241432724143634363Escherichia coli 55989, complete genomeconserved hypothetical protein; putative inner membrane protein2e-65247
NC_010468:111504:123082123082123444363Escherichia coli ATCC 8739, complete genomehypothetical protein2e-65247
NC_011415:4006500:401644140164414016803363Escherichia coli SE11 chromosome, complete genomehypothetical protein2e-65247
NC_016902:119935:131339131339131701363Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-65247
NC_004337:3590323:373741137374113737773363Shigella flexneri 2a str. 301, complete genomehypothetical protein3e-65246
NC_012947:126596:152055152055152378324Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein3e-43174
NC_009832:110239:124594124594124917324Serratia proteamaculans 568, complete genomehypothetical protein9e-41165
NC_009663:2056166:206342520634252063826402Sulfurovum sp. NBC37-1, complete genomehypothetical protein4e-30130