Pre_GI: BLASTP Hits

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Query: NC_010498:3988351:3998280 Escherichia coli SMS-3-5, complete genome

Start: 3998280, End: 3998702, Length: 423

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_013716:4306695:435134943513494351870522Citrobacter rodentium ICC168, complete genomeputative fimbrial subunit1e-39161
NC_015761:2373967:238324123832412383762522Salmonella bongori NCTC 12419, complete genomeFimbrial subunit4e-1477
NC_015761:2373967:238272823827282383231504Salmonella bongori NCTC 12419, complete genomeFimbrial subunit2e-1167.8