Some Help

Query: NC_010498:3291344:3314362 Escherichia coli SMS-3-5, complete genome

Start: 3314362, End: 3314925, Length: 564

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.

Search Results with any or all of these Fields

Host Accession, e.g. NC_0123..Host Description, e.g. Clostri...
Host Lineage, e.g. archae, Proteo, Firmi...
Host Information, e.g. soil, Thermo, Russia

SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011601:3338888:337183633718363372399564Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype II secretion protein2e-106384
NC_011745:3511600:353040835304083530971564Escherichia coli ED1a chromosome, complete genomehypothetical protein6e-106382
NC_011750:3584000:360392936039293604492564Escherichia coli IAI39 chromosome, complete genomehypothetical protein4e-105379
NC_011742:3277941:329759832975983298161564Escherichia coli S88 chromosome, complete genomehypothetical protein1e-104378
NC_007946:3289151:330989933098993310462564Escherichia coli UTI89, complete genomehypothetical type II secretion protein GspH1e-104378
NC_008563:3362058:338280633828063383369564Escherichia coli APEC O1, complete genomeputative type II secretion protein GspH1e-104378
NC_011751:3530954:355603535560353556598564Escherichia coli UMN026 chromosome, complete genomehypothetical protein2e-103374
NC_008253:3161311:320103032010303201593564Escherichia coli 536, complete genomehypothetical type II secretion protein GspH3e-102370
NC_012967:3012317:303317930331793033742564Escherichia coli B str. REL606 chromosome, complete genometype II secretion protein GspH1e-101368
NC_011740:2986514:298821329882132988776564Escherichia fergusonii ATCC 35469, complete genomeconserved hypothetical protein; putative exported protein5e-101366
NC_013364:3701895:376329637632963763826531Escherichia coli O111:H- str. 11128, complete genomeputative type II secretion protein GspH4e-95346
NC_011663:180889:182611182611183186576Shewanella baltica OS223 chromosome, complete genomegeneral secretion pathway protein H1e-1066.2
NC_016612:2902628:293988229398822940433552Klebsiella oxytoca KCTC 1686 chromosome, complete genometype II secretion protein7e-0650.1