Pre_GI: BLASTP Hits

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Query: NC_010498:3291344:3313994 Escherichia coli SMS-3-5, complete genome

Start: 3313994, End: 3314365, Length: 372

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_011745:3511600:353004035300403530411372Escherichia coli ED1a chromosome, complete genomeputative GspI-like type II secretion protein7e-54208
NC_011601:3338888:337146833714683371839372Escherichia coli O127:H6 str. E2348/69 chromosome, complete genometype II secretion protein1e-53207
NC_011742:3277941:329723032972303297601372Escherichia coli S88 chromosome, complete genometype II secretion protein (GspI-like)3e-53206
NC_008563:3362058:338243833824383382809372Escherichia coli APEC O1, complete genomeputative type II secretion protein GspI3e-53206
NC_007946:3289151:330953133095313309902372Escherichia coli UTI89, complete genomehypothetical type II secretion protein GspI3e-53206
NC_012967:3012317:303281130328113033182372Escherichia coli B str. REL606 chromosome, complete genometype II secretion protein9e-51198
NC_008253:3161311:320066232006623201033372Escherichia coli 536, complete genomehypothetical type II secretion protein GspI2e-50197
NC_011740:2986514:298877329887732989144372Escherichia fergusonii ATCC 35469, complete genomeputative type II secretion protein (GspI-like)3e-50196
NC_011751:3530954:355566735556673556038372Escherichia coli UMN026 chromosome, complete genomeputative type II secretion protein4e-50196
NC_013364:3701895:376292837629283763299372Escherichia coli O111:H- str. 11128, complete genomeputative type II secretion protein GspI5e-50196
NC_011750:3584000:360356136035613603932372Escherichia coli IAI39 chromosome, complete genomeputative GspI-like type II secretion protein1e-49194
NC_020064:3998715:405514340551434055511369Serratia marcescens FGI94, complete genomegeneral secretion pathway protein I2e-1271.2