Pre_GI: BLASTP Hits

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Query: NC_010498:3291344:3310702 Escherichia coli SMS-3-5, complete genome

Start: 3310702, End: 3311238, Length: 537

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_008253:3161311:319737331973733197909537Escherichia coli 536, complete genomehypothetical type II secretion protein GspM4e-94343
NC_008563:3362058:337914933791493379685537Escherichia coli APEC O1, complete genomeputative secretion pathway protein GspM1e-93342
NC_012967:3012317:302952230295223030058537Escherichia coli B str. REL606 chromosome, complete genomeputative general secretion pathway protein YghD6e-95345
NC_004431:3513147:353046635304663531002537Escherichia coli CFT073, complete genomePutative general secretion pathway protein M-type yghD1e-95348
NC_011745:3511600:352675135267513527287537Escherichia coli ED1a chromosome, complete genomeputative general secretion pathway protein YghD1e-94345
NC_011750:3584000:360027236002723600808537Escherichia coli IAI39 chromosome, complete genomeputative general secretion pathway protein YghD1e-94345
NC_013364:3701895:375963937596393760175537Escherichia coli O111:H- str. 11128, complete genomeputative type II secretion protein GspM1e-92338
NC_011601:3338888:336816433681643368715552Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomegeneral secretion pathway protein YghD4e-96350
NC_011742:3277941:329394132939413294477537Escherichia coli S88 chromosome, complete genomegeneral secretion pathway protein YghD1e-94344
NC_011751:3530954:355237835523783552914537Escherichia coli UMN026 chromosome, complete genomeputative general secretion pathway protein YghD9e-92335
NC_007946:3289151:330624233062423306778537Escherichia coli UTI89, complete genomeputative secretion pathway protein1e-94344
NC_011740:2986514:299189729918972992433537Escherichia fergusonii ATCC 35469, complete genomeputative secretion pathway M-type protein, membrane anchored2e-90330
NC_016612:2902628:294356629435662944060495Klebsiella oxytoca KCTC 1686 chromosome, complete genomegeneral secretion pathway M protein2e-0962
NC_011663:180889:186586186586187062477Shewanella baltica OS223 chromosome, complete genomegeneral secretion pathway protein M3e-1064.3
NC_007954:138410:140748140748141224477Shewanella denitrificans OS217, complete genomeGeneral secretion pathway M protein7e-1063.5