Pre_GI: BLASTP Hits

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Query: NC_010498:153755:170554 Escherichia coli SMS-3-5, complete genome

Start: 170554, End: 171009, Length: 456

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_004431:153907:170698170698171171474Escherichia coli CFT073, complete genomeDnaK suppressor protein6e-75279
NC_008563:149709:166171166171166644474Escherichia coli APEC O1, complete genomeDnaK suppressor protein6e-75279
NC_007946:149733:166195166195166668474Escherichia coli UTI89, complete genomeDnaK suppressor protein6e-75279
NC_000913:144577:160149160149160604456Escherichia coli K12, complete genomeDNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein8e-75278
NC_011740:165363:182134182134182589456Escherichia fergusonii ATCC 35469, complete genomeDNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein8e-75278
NC_011748:143755:160250160250160705456Escherichia coli 55989, complete genomeRNA polymerase-binding transcription factor8e-75278
NC_010468:3835259:383918938391893839644456Escherichia coli ATCC 8739, complete genometranscriptional regulator, TraR/DksA family8e-75278
NC_009801:143426:161615161615162070456Escherichia coli E24377A, complete genomeRNA polymerase-binding protein DksA8e-75278
NC_010473:118681:134253134253134708456Escherichia coli str. K-12 substr. DH10B, complete genomeDNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein8e-75278
CU928145:143755:160250160250160705456Escherichia coli 55989 chromosome, complete genomeDNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein8e-75278
AC_000091:144577:160149160149160604456Escherichia coli W3110 DNA, complete genometranscriptional regulator of rRNA transcription, DnaK suppressor protein8e-75278
CU928160:145276:160392160392160847456Escherichia coli IAI1 chromosome, complete genomeDNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein8e-75278
NC_011750:156799:171634171634172089456Escherichia coli IAI39 chromosome, complete genomeRNA polymerase-binding transcription factor8e-75278
AP010958:143358:161547161547162002456Escherichia coli O103:H2 str. 12009 DNA, complete genomeDNA-binding transcriptional regulator DskA of rRNA transcription, DnaK suppressor protein8e-75278
CP002185:146389:161505161505161960456Escherichia coli W, complete genomeDNA-binding transcriptional regulator of rRNA transcription, DnaK suppressor protein8e-75278
CP002516:3949061:394994339499433950398456Escherichia coli KO11, complete genometranscriptional regulator, TraR/DksA family8e-75278
NC_008253:149693:165598165598166053456Escherichia coli 536, complete genomeDnaK suppressor protein8e-75278
NC_016902:3949061:394994339499433950398456Escherichia coli KO11FL chromosome, complete genomeTraR/DksA family transcriptional regulator8e-75278
NC_013364:143492:161681161681162136456Escherichia coli O111:H- str. 11128, complete genomeDNA-binding transcriptional regulator DskA8e-75278
NC_013361:145461:162879162879163334456Escherichia coli O26:H11 str. 11368 chromosome, complete genomeRNA polymerase-binding transcription factor8e-75278
NC_013353:143358:161547161547162002456Escherichia coli O103:H2 str. 12009, complete genomeDNA-binding transcriptional regulator DskA of rRNA transcription, DnaK suppressor protein8e-75278
NC_012967:145582:163000163000163455456Escherichia coli B str. REL606 chromosome, complete genomeRNA polymerase-binding transcription factor8e-75278
NC_012947:3619384:362026636202663620721456Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completeRNA polymerase-binding transcription factor8e-75278
NC_012759:144576:160148160148160603456Escherichia coli BW2952 chromosome, complete genomeRNA polymerase-binding transcription factor8e-75278
NC_011745:149594:166150166150166605456Escherichia coli ED1a chromosome, complete genomeRNA polymerase-binding transcription factor8e-75278
NC_011742:149732:166194166194166649456Escherichia coli S88 chromosome, complete genomeRNA polymerase-binding transcription factor8e-75278
NC_011741:145276:160392160392160847456Escherichia coli IAI1 chromosome, complete genomeRNA polymerase-binding transcription factor8e-75278
NC_011601:149428:165973165973166428456Escherichia coli O127:H6 str. E2348/69 chromosome, complete genomeRNA polymerase-binding transcription factor8e-75278
NC_011415:146397:161513161513161968456Escherichia coli SE11 chromosome, complete genomeRNA polymerase-binding transcription factor8e-75278
NC_013961:2861949:287952928795292879984456Erwinia amylovora, complete genomeDnaK suppressor protein1e-72271
NC_007984:221030:242468242468242923456Baumannia cicadellinicola str. Hc (Homalodisca coagulata), completeDnaK suppressor protein DksA3e-61233
NC_011184:2421687:244543824454382445887450Vibrio fischeri MJ11 chromosome I, complete sequenceRNA polymerase-binding protein DksA8e-59225
NC_013960:2761353:276491127649112765348438Nitrosococcus halophilus Nc4 chromosome, complete genomeRNA polymerase-binding protein DksA5e-45179
NC_014752:23601:304713047130887417Neisseria lactamica ST-640, complete genomeDnaK suppressor protein5e-1890.1
NC_016027:1647110:165467416546741655108435Gluconacetobacter xylinus NBRC 3288, complete genometranscriptional regulator8e-1579.3
NC_000963:1024000:102540510254051025836432Rickettsia prowazekii str. Madrid E, complete genomeDNAK SUPPRESSOR PROTEIN HOMOLOG (dksA)1e-1478.6
NC_017049:1022000:102367410236741024105432Rickettsia prowazekii str. Chernikova chromosome, complete genomeDnaK suppressor protein1e-1478.6
NC_017050:1024000:102532410253241025755432Rickettsia prowazekii str. Katsinyian chromosome, complete genomeDnaK suppressor protein1e-1478.6
NC_017056:995500:102531510253151025746432Rickettsia prowazekii str. BuV67-CWPP chromosome, complete genomeDnaK suppressor protein1e-1478.6
NC_013209:2782500:278679127867912787204414Acetobacter pasteurianus IFO 3283-01, complete genometranscriptional regulator TraR/DksA2e-1477.8
NC_017100:2782303:278658327865832786996414Acetobacter pasteurianus IFO 3283-03, complete genometranscriptional regulator TraR/DksA2e-1477.8
NC_017108:2779303:278392027839202784333414Acetobacter pasteurianus IFO 3283-12, complete genometranscriptional regulator TraR/DksA2e-1477.8
NC_017111:2779321:278393827839382784351414Acetobacter pasteurianus IFO 3283-32, complete genometranscriptional regulator TraR/DksA2e-1477.8
NC_017121:2781000:278534027853402785753414Acetobacter pasteurianus IFO 3283-07, complete genometranscriptional regulator TraR/DksA2e-1477.8
NC_017125:2782283:278656327865632786976414Acetobacter pasteurianus IFO 3283-22, complete genometranscriptional regulator TraR/DksA2e-1477.8
NC_017146:2782325:278660527866052787018414Acetobacter pasteurianus IFO 3283-26, complete genometranscriptional regulator TraR/DksA2e-1477.8
NC_017150:2689920:269453726945372694950414Acetobacter pasteurianus IFO 3283-01-42C, complete genometranscriptional regulator TraR/DksA2e-1477.8
NC_017057:1024000:102598110259811026412432Rickettsia prowazekii str. RpGvF24 chromosome, complete genomeDnaK suppressor protein5e-1476.6
NC_020181:527592:544856544856545278423Enterobacter aerogenes EA1509E, complete genomeC4-type zinc finger protein, DksA/TraR family3e-1063.9
NC_009792:923155:930791930791931213423Citrobacter koseri ATCC BAA-895, complete genomehypothetical protein3e-1063.9
NC_015567:2039443:204261520426152043040426Serratia sp. AS9 chromosome, complete genomeTraR/DksA family transcriptional regulator3e-0960.8
NC_015566:2039431:204260320426032043028426Serratia sp. AS12 chromosome, complete genomeTraR/DksA family transcriptional regulator3e-0960.8
NC_014926:608894:626126626126626509384Thermovibrio ammonificans HB-1 chromosome, complete genometranscriptional regulator, TraR/DksA family3e-0857.8
NC_004578:3921199:393601739360173936421405Pseudomonas syringae pv. tomato str. DC3000, complete genomednaK suppressor protein, putative1e-0652.4
NC_007492:3801237:380481138048113805215405Pseudomonas fluorescens PfO-1, complete genomeTranscriptional regulators, TraR/DksA family1e-0652
NC_007797:1451804:145741714574171457851435Anaplasma phagocytophilum HZ, complete genomeputative dnaK suppressor protein9e-0649.3