Pre_GI: BLASTP Hits

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Query: NC_010498:1210145:1230010 Escherichia coli SMS-3-5, complete genome

Start: 1230010, End: 1230921, Length: 912

Host Lineage: Escherichia coli; Escherichia; Enterobacteriaceae; Enterobacteriales; Proteobacteria; Bacteria

General Information: Escherichia coli SMS-3-5 was isolated from a toxic-metal contaminated site, Shipyard Creek, Charleston, South Carolina, USA. This strain is highly resistant to a number of antibiotics. This organism was named for its discoverer, Theodore Escherich, and is one of the premier model organisms used in the study of bacterial genetics, physiology, and biochemistry. This enteric organism is typically present in the lower intestine of humans, where it is the dominant facultative anaerobe present, but it is only one minor constituent of the complete intestinal microflora. E. coli, is capable of causing various diseases in its host, especially when they acquire virulence traits. E. coli can cause urinary tract infections, neonatal meningitis, and many different intestinal diseases, usually by attaching to the host cell and introducing toxins that disrupt normal cellular processes.




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SubjectStartEndLengthSubject Host DescriptionCDS descriptionE-valueBit score
NC_016902:1902431:192501019250101925927918Escherichia coli KO11FL chromosome, complete genomehypothetical protein2e-136484
CP002516:1902431:192501019250101925927918Escherichia coli KO11, complete genomeprotein of unknown function DUF8082e-136484
NC_016822:2201388:220432622043262205243918Shigella sonnei 53G, complete genomehypothetical protein4e-136484
NC_012947:1769438:180797118079711808888918Escherichia coli 'BL21-Gold(DE3)pLysS AG' chromosome, completehypothetical protein2e-135482
AC_000091:2027648:203058620305862031503918Escherichia coli W3110 DNA, complete genomeconserved inner membrane protein2e-135482
NC_015761:1970042:1972188197218819732491062Salmonella bongori NCTC 12419, complete genomeintegral membrane protein3e-120431
NC_011205:1227373:124630512463051247216912Salmonella enterica subsp. enterica serovar Dublin str. CT_02021853hypothetical protein6e-120430
NC_013716:2139952:213995221399522140797846Citrobacter rodentium ICC168, complete genomehypothetical protein1e-119429
NC_017046:2026672:202881120288112029722912Salmonella enterica subsp. enterica serovar Typhimurium str. 798hypothetical protein4e-119427
NC_016863:2029340:203147920314792032390912Salmonella enterica subsp. enterica serovar Typhimurium str. UK-1hypothetical protein4e-119427
NC_016857:2027311:202945020294502030361912Salmonella enterica subsp. enterica serovar Typhimurium str. ST4/74Inner membrane protein yedI4e-119427
NC_016810:2027311:202945020294502030361912Salmonella enterica subsp. enterica serovar Typhimurium strhypothetical protein4e-119427
NC_011283:1901229:192142719214271922338912Klebsiella pneumoniae 342 chromosome, complete genomehypothetical protein1e-113409
NC_021066:601029:620293620293621204912Raoultella ornithinolytica B6, complete genomehypothetical protein2e-111402
NC_016612:5208936:520919152091915210102912Klebsiella oxytoca KCTC 1686 chromosome, complete genomehypothetical protein1e-111402
NC_015663:4906652:490665249066524907563912Enterobacter aerogenes KCTC 2190 chromosome, complete genomehypothetical protein4e-101368
NC_014562:1883517:188351718835171884428912Pantoea vagans C9-1 chromosome, complete genomeInner membrane protein yedI5e-97354
NC_014306:3006028:300602830060283006939912Erwinia billingiae Eb661, complete genomeConserved uncharacterized protein2e-93342
NC_008260:3053775:305792730579273058859933Alcanivorax borkumensis SK2, complete genomehypothetical protein5e-66251
NC_015637:325561:325561325561326472912Vibrio anguillarum 775 chromosome chromosome II, complete sequencehypothetical protein7e-64244
NC_013222:3060482:308416730841673085030864Robiginitalea biformata HTCC2501, complete genomehypothetical protein1e-47189
NC_013169:2045000:2057888205788820589881101Kytococcus sedentarius DSM 20547, complete genomehypothetical protein1e-38160
NC_017192:1841987:1871540187154018726521113Arcobacter sp. L, complete genomehypothetical protein1e-36154
NC_013441:27877:551235512356097975Gordonia bronchialis DSM 43247, complete genomeprotein of unknown function DUF8081e-33143
NC_013016:656000:657583657583658413831Neisseria meningitidis alpha14 chromosome, complete genomehypothetical protein6e-28124
NC_003112:744476:746054746054746809756Neisseria meningitidis MC58, complete genomehypothetical protein6e-28124
NC_015673:1794590:179792617979261798870945Corynebacterium resistens DSM 45100 chromosome, complete genomehypothetical protein7e-27121
NC_014391:4570567:4575483457548345765201038Micromonospora aurantiaca ATCC 27029 chromosome, complete genomehypothetical protein6e-26118